DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10809 and Psmd10

DIOPT Version :9

Sequence 1:NP_001163403.1 Gene:CG10809 / 39159 FlyBaseID:FBgn0036052 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_446377.1 Gene:Psmd10 / 116722 RGDID:620350 Length:231 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10809NP_001163403.1 Ank_2 167..263 CDD:289560
ANK repeat 167..193 CDD:293786
ANK 170..276 CDD:238125
ANK repeat 195..226 CDD:293786
ANK repeat 228..263 CDD:293786
Psmd10NP_446377.1 ANK 1 3..36
Ank_4 13..60 CDD:290365
ANK 36..159 CDD:238125
ANK 2 37..69
ANK repeat 39..70 CDD:293786
Ank_2 44..136 CDD:289560
ANK 3 70..102
ANK repeat 72..103 CDD:293786
ANK 4 103..135
ANK repeat 105..136 CDD:293786
Ank_2 110..202 CDD:289560
ANK 5 136..168
ANK repeat 138..169 CDD:293786
ANK 6 169..201
Ank 171..203 CDD:278452
ANK repeat 171..202 CDD:293786
ANK 7 202..226
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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