DRSC/TRiP Functional Genomics Resources

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Protein Alignment RasGAP1 and LOC570938

DIOPT Version :9

Sequence 1:NP_001261664.1 Gene:RasGAP1 / 39158 FlyBaseID:FBgn0004390 Length:1181 Species:Drosophila melanogaster
Sequence 2:XP_021334215.1 Gene:LOC570938 / 570938 -ID:- Length:383 Species:Danio rerio


Alignment Length:533 Identity:124/533 - (23%)
Similarity:193/533 - (36%) Gaps:195/533 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LKVKIGEAKNLSSRNAANTSCSTQGTRDVYCTIALDQEEICRTPTIERTLTPFFGEEHQFKIPRR 109
            |..:|.|.|||.:::.:       ||.|.||.:.:|.|.:.||.|:.:.|.||:|||:...:|..
Zfish     7 LYFRIVEGKNLPAKDVS-------GTSDPYCIVKVDNEVVARTATVWKNLNPFWGEEYTLHLPMG 64

  Fly   110 FRYLTIYLWDRD-MKQDKPIGKIAIKREELHMYNHK--DHWFSLRPVDQDSEVQGMVNVEVAFTE 171
            |..||.|:.|.| :..|..||||::.::.: ...||  |:|.:|..||.|.||||.:::.:   |
Zfish    65 FHTLTFYVMDEDTIGHDDVIGKISLSKDVI-AAQHKGLDNWLNLTRVDPDEEVQGEIHLAL---E 125

  Fly   172 AQQTQSLSEGIDLGQHTLRHHQNLPHHSHQQRAHLNDYKENSELSNIQRASAAAASSSSAAMTLK 236
            .|:.              :|...|..|..:.|                                 
Zfish   126 LQRE--------------KHRSCLSCHIIEAR--------------------------------- 143

  Fly   237 TRAAGLFGHVHHPPSQTQHFPIINTTSTSSDQLSNWKSHGRFVGVTIKVPACVDLAKKQ--GTCD 299
                                                                 |||.:.  ||.|
Zfish   144 -----------------------------------------------------DLAPRDITGTSD 155

  Fly   300 PFVVCTAHYSNKHQVTRRTKQRKKTVDPEFDEAMYFDL-HIDADAGSTNTTGSNKSAGSLESSAN 363
            ||.  ...|:|   ::..|...|||..|.:||.:...| ..|.|.|..                 
Zfish   156 PFT--RIIYNN---LSAETSIIKKTRFPHWDETLELCLDEADEDEGGM----------------- 198

  Fly   364 KGYSIYPVGGADLVEIVVSVWHDAHGAMSDKVFLGEVRLP---MLNKQEQQAVNPSAWYYLQPRS 425
                           :.|.||.......:|  |||:|.:|   :|.....|     .|:.|.|..
Zfish   199 ---------------VTVEVWDWDMVGKND--FLGKVEIPLSCLLRSPVLQ-----GWFRLMPLG 241

  Fly   426 MTHSSRSLNATPRSCATPPGTRLSVDSTIGSLRLNLNYTADHVFPLATYDDLMNLLLES------ 484
            .|..                   :....:|:|||.:....:.:.|...|..||:||:|:      
Zfish   242 NTED-------------------NAGGKLGALRLKVRLVEERILPSVYYQPLMDLLVEAVISPSE 287

  Fly   485 VDQRPITVSAVSILGEL--VSGKTEVAQPLVRLFTHTERIAPIIKALADHEISHLTDPTTIFRGN 547
            ||:    .:.:::|.|:  |..:.:||..||:|:.....:.|.:..|...|:...|||.|:||.|
Zfish   288 VDE----ATTLTLLEEVTTVDSRQDVAMTLVKLYLGQGLVVPFLDYLNTREVHSTTDPNTLFRSN 348

  Fly   548 TLVSKMMDEAMRL 560
            :|.||.|::.|::
Zfish   349 SLASKAMEQFMKV 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RasGAP1NP_001261664.1 C2A_RasA2_RasA3 44..169 CDD:176046 46/126 (37%)
C2B_RasA3 280..462 CDD:175977 40/187 (21%)
RasGAP 449..797 CDD:214617 36/120 (30%)
RasGAP_GAP1_like 473..740 CDD:213330 31/96 (32%)
PH 761..859 CDD:278594
PH_GAP1-like 763..867 CDD:269950
BTK 862..897 CDD:128417
LOC570938XP_021334215.1 C2 6..126 CDD:326325 46/129 (36%)
C2 134..259 CDD:326325 43/273 (16%)
RasGAP 267..>364 CDD:321996 32/99 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000825
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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