DRSC/TRiP Functional Genomics Resources

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Protein Alignment RasGAP1 and rasal1

DIOPT Version :9

Sequence 1:NP_001261664.1 Gene:RasGAP1 / 39158 FlyBaseID:FBgn0004390 Length:1181 Species:Drosophila melanogaster
Sequence 2:XP_017948045.1 Gene:rasal1 / 493411 XenbaseID:XB-GENE-942936 Length:831 Species:Xenopus tropicalis


Alignment Length:1022 Identity:264/1022 - (25%)
Similarity:422/1022 - (41%) Gaps:279/1022 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LKVKIGEAKNLSSRNAANTSCSTQGTRDVYCTIALDQEEICRTPTIERTLTPFFGEEHQFKIPRR 109
            |..::.|.|||.:::.:       ||.|.||.:.:|.|.:.||.|:.|.|.||:|||....:|..
 Frog     7 LYFRLVEGKNLPAKDVS-------GTSDPYCIVKVDNEVVARTATVWRDLNPFWGEEFTLHLPLG 64

  Fly   110 FRYLTIYLWDRD-MKQDKPIGKIAIKREELHMYNHK---DHWFSLRPVDQDSEVQGMVNVEVAFT 170
            |..|:.|:.|.| :..|..||||::.:|  .:.:|.   |.|.:|..||.|.||||.:.:|:...
 Frog    65 FHTLSFYVMDEDTIGHDDVIGKISLTKE--FIASHPRGIDSWVNLGRVDPDEEVQGEIYLELHIM 127

  Fly   171 EAQQTQSLSEGIDLGQHTLRHHQNLPHHSHQQRAHLNDYKENSELSNIQRASAAAASSSSAAMTL 235
            :.|...:|                   |.|                                 .|
 Frog   128 QDQYRSTL-------------------HCH---------------------------------VL 140

  Fly   236 KTRAAGLFGHVHHPPSQTQHFPIINTTSTSSDQLSNWKSHGRFVGVTIKVPACVDLAKK--QGTC 298
            :.|                                                   |||.:  .||.
 Frog   141 EAR---------------------------------------------------DLAPRDISGTS 154

  Fly   299 DPFV--VCTAHYSNKHQVTRRTKQRKKTVDPEFDEAMYFDLHIDADAGSTNTTGSNKSAGSLESS 361
            ||||  .|       :..|..|...|:|..|.::|.:.|||.                       
 Frog   155 DPFVRIFC-------NNQTLETSVIKRTRFPRWNEVLEFDLR----------------------- 189

  Fly   362 ANKGYSIYPVGGADLVEIVVSVWHDAHGAMSDKVFLGEVRLPMLNKQEQQAVNPSAWYYLQPRSM 426
                 .|..:..:|.: |.:.||.......:|  |||.|..|:....:..||  ::|:.|.|...
 Frog   190 -----GIEELDPSDQM-ISIEVWDWDMVGKND--FLGRVWFPIEPLHKSPAV--TSWFRLLPFGN 244

  Fly   427 THSSRSLNATPRSCATPPGTRLSVDSTIGSLRLNLNYTADHVFPLATYDDLMNLLLESV---DQR 488
            |.....                   ..:||||:.::.:.:.:.|...|..|:.||:|||   ||.
 Frog   245 TDEENG-------------------GKLGSLRIKVSLSEERILPSLYYQTLIQLLVESVQSPDQG 290

  Fly   489 PITVSAVSILGELVSGKT--EVAQPLVRLFTHTERIAPIIKALADHEISHLTDPTTIFRGNTLVS 551
            ...:  :::|.|:.|.::  |||..||::|.........:..|...|:....||.|:||.|:|.|
 Frog   291 DCNL--LALLEEICSAESRQEVAVKLVKIFLGQGLAVTFLDKLNQREVKRTVDPNTLFRSNSLAS 353

  Fly   552 KMMDEAMRLSGLHYLHQTLRPVLSQIVAEKKPCEIDPSKI--------------KDRSAVDTNLH 602
            |.|::.|::.|:.:||:.|||::|:|..||:..|:||.||              .:...::::|.
 Frog   354 KSMEQYMKIVGMPFLHEILRPIISKIFEEKRYIELDPCKIDLNRSRRISFKGSMSEHHILESSLE 418

  Fly   603 NLQDYVERVFEAITKSADRCPKVLCQIFHDLRECAGEHFPS--NREVRYSVVSGFIFLRFFAPAI 665
            .|:.|:..:.:||.:|.::||..:...|..|.:...|.||.  .::|:|:.:|||:|||||||||
 Frog   419 TLRGYLSDIIDAILRSVEQCPSGMRLCFKQLHKRVEEQFPGAVYQDVKYAAISGFLFLRFFAPAI 483

  Fly   666 LGPKLFDLTTERLDAQTSRTLTLISKTIQSLGNLVSSRSSQQT--CKEEFTVELYKKFCTEQHVD 728
            |.||||.|.....|.:|:|||.||:|.:||:|||     .||.  .||::...|:.  ..:|.|.
 Frog   484 LTPKLFHLREHHADPRTARTLLLIAKAVQSIGNL-----GQQLGYGKEQWMAPLHP--FIQQSVG 541

  Fly   729 AVKHFLE-VISTPSHASSSVHPAAAAATPLE----------------PVLLKEGLMTKYPTSRK- 775
            .::.||: :|...|.....:.....|...|:                .|.:|||.:.|    || 
 Frog   542 RLRDFLDRLIDMESETVEQIEKMNKAHKGLQRSFSKCGQISRTLFHPSVTIKEGFLHK----RKA 602

  Fly   776 -------RFGRQFKQRHFRLTTHSLSYAKSKGKQPICDIPLQEIASVEQLKDKSFKMQNCFKIVH 833
                   ||  .||:|:|.|::.:|||:||...|....||:..|.:||::.:.:|:..|..:|:.
 Frog   603 EAVNLVTRF--TFKKRYFWLSSQTLSYSKSPDWQVRSSIPVHRICAVERVDENAFQHPNMMQIIS 665

  Fly   834 NDRS------LIVQTTNCVEEREWFDLLHKICLMNSIRMQYFHPSAFVSGFYSCCGRSDENSPGC 892
            .|..      :.:|..|..|..:|...|.|:.|.|...:..:||.|:.:..::||.::|....||
 Frog   666 QDSETQGGHIMYIQCKNVNELNQWLSALRKVSLCNQRLLPTYHPGAYRNAHWTCCLQTDRTVRGC 730

  Fly   893 KKV-LDKTMDYFQMDLVTALDPALDLQRIHTLIMSNMSVL-ESLLDPLTYHQSLSQTQHQQHNPL 955
            .:. |..|:.    |....|||..:.|.::..::.:..|| :..|:                |.|
 Frog   731 SRTHLAVTLG----DWSDPLDPDAEAQVLYRHLLLSKDVLRDKYLE----------------NSL 775

  Fly   956 VPLATDLQKHSPQAFAEFKRT---------IEKLREKAYAIDRDHRD 993
            .....:.:.||.:.||....:         ||.|.....|.::..|:
 Frog   776 NAEKAECKGHSEKGFAGMAVSSPARCLLFAIEDLERAHQAFEKRERE 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RasGAP1NP_001261664.1 C2A_RasA2_RasA3 44..169 CDD:176046 46/127 (36%)
C2B_RasA3 280..462 CDD:175977 40/185 (22%)
RasGAP 449..797 CDD:214617 127/395 (32%)
RasGAP_GAP1_like 473..740 CDD:213330 102/290 (35%)
PH 761..859 CDD:278594 34/111 (31%)
PH_GAP1-like 763..867 CDD:269950 36/117 (31%)
BTK 862..897 CDD:128417 9/35 (26%)
rasal1XP_017948045.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145372at2759
OrthoFinder 1 1.000 - - FOG0000825
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10194
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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