DRSC/TRiP Functional Genomics Resources

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Protein Alignment RasGAP1 and Rasal3

DIOPT Version :9

Sequence 1:NP_001261664.1 Gene:RasGAP1 / 39158 FlyBaseID:FBgn0004390 Length:1181 Species:Drosophila melanogaster
Sequence 2:XP_006241121.1 Gene:Rasal3 / 314596 RGDID:1309019 Length:1038 Species:Rattus norvegicus


Alignment Length:639 Identity:146/639 - (22%)
Similarity:217/639 - (33%) Gaps:199/639 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 RAAGLFGHVHHPPSQTQHFPIIN---------------------------TTSTSSDQ--LSNWK 273
            |||    |:..||:  ...|:.|                           .:|.||.|  |.|.|
  Rat   141 RAA----HIPEPPA--PDMPVWNIDGFALLEGRLVMLGEEEGPRQIRMGSASSESSMQAALGNLK 199

  Fly   274 SHGRFVGVTIKVPACVDLAKKQGTCDPFVVCTAHYSNKHQVTRRTKQRKKTVDPEFDEAMYFDLH 338
                            |..:..|..:|....:....|..::.:|.|::|:.              
  Rat   200 ----------------DPVRTPGKIEPEATGSNQVHNVRKLLKRLKEKKRA-------------- 234

  Fly   339 IDADAGS-TNTTGSNKSAGSLESSANKGYSIYPVGGADL-VEIVVSVWHDAHGAMSDKVFLGEVR 401
             .::.|: |...|.:.:.||.||.|.       :...|| ||..|.|| ..|.::..:.:..:|.
  Rat   235 -KSELGAHTPRDGPSSALGSRESLAT-------LSELDLGVERDVRVW-PLHPSLLGEPYCFQVT 290

  Fly   402 ---------------------------LPMLNKQEQQAVNPSAWYYLQ---PRSMTHSSRS---- 432
                                       .|..:..|:|....:.|.:..   ||:.....|:    
  Rat   291 WAGGSRCFSCRSSAERDRWIEDLRRQFQPSQDNVERQETWLTVWVHEAKGLPRAAAPGVRAELWL 355

  Fly   433 -----LNATPRSC-------------ATPPGTRLSV--------DSTIGS--------------- 456
                 ....||:.             |.||..|||:        .:|:|.               
  Rat   356 DGALLARTAPRAGPDQLFWAERFHFEALPPARRLSLRLRGAGPAGATVGRVVLELDEVSIPRAPA 420

  Fly   457 -----------------LRLNLNYTADHVFPLATYDDLMNLLLESVDQRPITVS-AVSILGELVS 503
                             ||..:......|.|...|.:|...|.....:..:.:. |:|     ..
  Rat   421 AGLERWFPVLGAPAGAVLRARIRVRCLRVLPSERYKELAEFLTFHYARLCMALEPALS-----AQ 480

  Fly   504 GKTEVAQPLVRLFTHTERIAPIIKALADHEISHLTD-PTTIFRGNTLVSKMMDEAMRLSGLHYLH 567
            .|.|:|..:||:...|.|...::..|...|:..... ...:||.|||.:|.:||.|:|....||.
  Rat   481 AKEELAAAMVRVLRATGRAQALVTDLGTAELERCGGREALLFRENTLATKAIDEYMKLVAQEYLQ 545

  Fly   568 QTLRPVLSQIVAEKKPCEIDPSKIKDRSAVDTNLHNLQDYVERVFEAITKSADRCPKVLCQIFHD 632
            :||..|:..:.|..:.||:||||........... .|:...|.|||.|..|.:..|..|..:|.:
  Rat   546 ETLGQVVRSLCASTEDCEVDPSKCPTPELPKCQA-RLRSSCEEVFENIIHSYNYFPAELGTVFSN 609

  Fly   633 LRE-CAGEHFPSNREVRYSVVSGFIFLRFFAPAILGPKLFDLTTERLDAQTSRTLTLISKTIQSL 696
            .|| |...   .:..:...:|...:|||...||||.|.||.|..|......:||||||:|.||:|
  Rat   610 WREACKAR---GSEALGPRLVCASLFLRLLCPAILAPSLFGLAPEHPAPGPARTLTLIAKVIQNL 671

  Fly   697 GNLVSSRSSQQTCKEEFTVELYKKFCT---EQHVDAVKHFLEVI------STPS 741
            .|          |......|.|..|..   |.|..|::|||:.:      :|||
  Rat   672 AN----------CAPFGEKEAYMVFMNSFLEDHGPAMRHFLDQVAMVDTDTTPS 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RasGAP1NP_001261664.1 C2A_RasA2_RasA3 44..169 CDD:176046
C2B_RasA3 280..462 CDD:175977 43/275 (16%)
RasGAP 449..797 CDD:214617 93/345 (27%)
RasGAP_GAP1_like 473..740 CDD:213330 83/278 (30%)
PH 761..859 CDD:278594
PH_GAP1-like 763..867 CDD:269950
BTK 862..897 CDD:128417
Rasal3XP_006241121.1 PH-like 200..346 CDD:302622 30/168 (18%)
C2 319..451 CDD:301316 20/131 (15%)
RasGAP_DAB2IP 443..766 CDD:213338 88/292 (30%)
Rep_3 <775..882 CDD:302843
TMF_DNA_bd 913..973 CDD:289127
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338169
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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