DRSC/TRiP Functional Genomics Resources

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Protein Alignment RasGAP1 and vap

DIOPT Version :10

Sequence 1:NP_001261664.1 Gene:RasGAP1 / 39158 FlyBaseID:FBgn0004390 Length:1181 Species:Drosophila melanogaster
Sequence 2:XP_312197.3 Gene:vap / 1273239 VectorBaseID:AGAMI1_012282 Length:948 Species:Anopheles gambiae


Alignment Length:592 Identity:139/592 - (23%)
Similarity:236/592 - (39%) Gaps:118/592 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 LRPVDQDSEVQGMVNVEVAFTEAQQTQSLSEGIDLGQHTLRHHQNLPHHSHQQRAHLNDYKENSE 214
            :.||...|:.:......:|....:...:|.|..|  |:.|:..:.:.||.:..:      |.:..
Mosquito   327 MHPVINGSQPEYHPPTNLASAAEKIYATLRECRD--QNMLKKTKGIKHHGYLLK------KSDKT 383

  Fly   215 LSNIQRASAAAASSSSAAMTL-----KTRAAGLFG-------HVHHPPSQTQH-FPII------- 259
            ....|...|.....|...:..     ||:..||..       ..|....:.|| |.|:       
Mosquito   384 AKWKQLFFALLVEGSETHLCFYDSPKKTKPKGLIDLSCAYLYQCHESFWERQHCFQIVERALPCL 448

  Fly   260 --------NTTSTSSDQLSNWKSH--GRFVGVTIKVP-----ACVDLAKKQGTCDPFVVCTAHYS 309
                    |......:.:|..|||  .:......|||     .|::|...:....||.:....|.
Mosquito   449 ATITYLCANNQECYVEWISALKSHCVSQLSKAQSKVPRLRELRCLNLQILEAHRLPFKLVPHPYC 513

  Fly   310 --NKHQVTRRTKQRKKTV-DPEFDEAMYFDLHIDADAGSTNTTGSNKSAGSLESSANKGYSIYPV 371
              :.:|| :..|.|.||. ||.::|....| .:..|..:...|..::.....:|           
Mosquito   514 VVSLNQV-KVGKTRVKTAPDPVWEEEFVLD-DVPPDVVTVTITVLSRGKRGKDS----------- 565

  Fly   372 GGADLVEIVVSVWHDAHGAMSDKVFLGEVRLPMLNKQEQQAVNPSAWYYLQPRSMTHSSRSLNAT 436
               ::.|:.|.:                  ..:.|.||.:     .|:                 
Mosquito   566 ---EVAELTVDL------------------CSLKNGQETE-----EWF----------------- 587

  Fly   437 PRSCATPPGTRLSVDSTIGSLRLNLNYTADHVFPLATYDDLMNLLLESVDQRPITVSAVSILGEL 501
            |.:..||.|       ..||:||.:.|..|.|.|...|..|..||:||      .::||..|.|:
Mosquito   588 PLNGMTPMG-------EWGSIRLRIRYLDDLVMPCEEYSPLQQLLVES------ELNAVRALSEI 639

  Fly   502 V-SGKTEVAQPLVRLFTHTERIAPIIKALADHEISHLTDPTTIFRGNTLVSKMMDEAMRLSGLHY 565
            . :.:..:|..|:::|.|.:|...:::.|...|::...:.:|:|||.:|.:.:||..||.....:
Mosquito   640 CHNDRIPLATSLLKVFRHEKRETELLRILCQAEVARENETSTLFRGASLATTLMDLYMRAECTLF 704

  Fly   566 LHQTLRPVLSQIVAEKKPCEIDPSKIKDRSAVDTNLHNLQDYVERVFEAITKSADRCPKVLCQIF 630
            |...:...:.:|:..|:..|::|:|:.......:|...|...:::|.::|..|.|.||:.:..|.
Mosquito   705 LQSAVSDTVQRILDSKQSAELNPTKMDVNDDACSNAEFLLMILDQVTQSIFTSPDACPRTVRYIC 769

  Fly   631 HDLRECAGEHF--PSNREVRYSVVSGFIFLRFFAPAILGPKLFDLTTERLDAQTSRTLTLISKTI 693
            :.|::.....:  ||.|.||..|||||||||...||:|.|:.|.|..|......:|:|.:::|.:
Mosquito   770 NCLQKAVVAKWPSPSERLVRTRVVSGFIFLRLLCPALLNPRQFGLVNETPHQMATRSLIMVAKCL 834

  Fly   694 QSLGNLV 700
            |:|.|||
Mosquito   835 QNLANLV 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RasGAP1NP_001261664.1 C2A_RasA2_RasA3 44..169 CDD:176046 3/18 (17%)
C2B_RasA3 280..462 CDD:175977 35/189 (19%)
RasGAP_GAP1_like 473..740 CDD:213330 71/231 (31%)
PH_GAP1-like 763..867 CDD:269950
BTK 862..897 CDD:128417
vapXP_312197.3 SH2 51..155 CDD:472789
SH3_RasGAP 172..230 CDD:212722
SH2_Cterm_RasGAP 241..315 CDD:198217
PH_RASA1 368..473 CDD:270080 19/110 (17%)
C2_Ras_p21A1 488..611 CDD:176045 33/185 (18%)
RasGAP 609..948 CDD:470620 74/239 (31%)
Blue background indicates that the domain is not in the aligned region.

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