DRSC/TRiP Functional Genomics Resources

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Protein Alignment RasGAP1 and rasal3

DIOPT Version :9

Sequence 1:NP_001261664.1 Gene:RasGAP1 / 39158 FlyBaseID:FBgn0004390 Length:1181 Species:Drosophila melanogaster
Sequence 2:XP_002935455.2 Gene:rasal3 / 100488943 XenbaseID:XB-GENE-6048180 Length:1009 Species:Xenopus tropicalis


Alignment Length:1156 Identity:228/1156 - (19%)
Similarity:393/1156 - (33%) Gaps:353/1156 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 QTQSLSEGIDLG---------------------QHTLRHHQNLPHHSHQQRAHLNDYKENSELSN 217
            |..:|.|..|||                     :|||.........|  ::.|.:.:::.|....
 Frog    14 QDSNLPETSDLGSYQWNTAHGQKGGVWGRLQGWRHTLMLQAKETQGS--KKKHRSLFRKKSPSEP 76

  Fly   218 IQRASAAAASSSSAAM----TLKTRAAGLFGHVHHP-PSQTQHFPIINTTSTSSDQLSNWKSHGR 277
            ..|.......|.|..:    .::....|:.|.|..| |......|:.:        :||:.    
 Frog    77 PSRGLTKYLHSVSQRLGRKKDIRPSLDGIEGPVPLPVPVSAPEIPVWD--------ISNFS---- 129

  Fly   278 FVGVTIKVPACVDLAK--KQGTCDPFVVCTAHYSNK------HQVTRRTKQRKKTVDPEFDEAMY 334
                  .:..|:.|.|  :||.|        |..::      ..:|.:|.|....|||...|.  
 Frog   130 ------LIDGCLLLTKGDEQGAC--------HIRSRTGSCVSKSLTEQTDQTDGVVDPPVPEG-- 178

  Fly   335 FDLHIDADAGS--TNTTG--------SNKSAGSLESSANKGYSIY----PVGGADLVEIV----- 380
               ::|.|..:  .|..|        ..:..||..|...:..|::    .:||.:::::|     
 Frog   179 ---NVDPDTKNQFNNVKGLIQKRKKKKTRKKGSASSLQQEERSLHGSRESLGGVEILDLVNEKDV 240

  Fly   381 -VSVWH----------DAHGAMSDKVF--------------LGEVRLPMLNKQEQQAVNPSAWYY 420
             :...|          :...|.|.:.|              |..:..|..:..|:|..:.|.|  
 Frog   241 TIKALHSSILGERYCFEIITAESSRCFACSSLQERDRWIENLRRIVQPDKDNFERQESSLSLW-- 303

  Fly   421 LQPRSMTHSSRSLNAT---PRSC------------------------------------------ 440
                  .|.::.|..:   .|||                                          
 Frog   304 ------IHEAKGLPVSGPGSRSCYFCEVQLDGCLYGRTSSKAPEAGVVFWGESFNLRDLSSVQGH 362

  Fly   441 -----------ATPPGT-RLSVDS---------TIG---SLRLNLNYTADHVFPLATYDDLMNLL 481
                       .|..|| .|:::.         .:|   :||:...|....|.|:..|.:....|
 Frog   363 MALHLLQEGKETTGVGTVTLALEGMKDGAEKWVPLGGEMALRVRGRYRKLSVLPVMQYKEFAEYL 427

  Fly   482 ----LE-SVDQRPITVSAVSILGELVSGKTEVAQPLVRLFTHTERIAPIIKALADHEIS-HLTDP 540
                :| |....|| :||        ..|.|:.:.||.:...|.:....:..|...||| |....
 Frog   428 TWRYMELSRAMEPI-LSA--------REKEELGRSLVYVLQSTGKAKEFLVDLGVAEISRHDGQD 483

  Fly   541 TTIFRGNTLVSKMMDEAMRLSGLHYLHQTLRPVLSQIVAEKKPCEIDPSKIKDRSAVDTNLHNLQ 605
            :.|||.||:|:|.::|.|::.|..||.:||.|.:::|...:...|:||.:..... :..|...|.
 Frog   484 SLIFRENTIVTKAIEEYMKMVGQTYLQETLGPFVNRIYTSEDSHEVDPLRCSPED-LGENRGQLW 547

  Fly   606 DYVERVFEAITKSADRCPKVLCQIFHDLR-ECAGEHFPSNREVRYSVVSGFIFLRFFAPAILGPK 669
            ...|...::|.:|.:..|..|.:||...: |.|....|:   :...:||..:||||..||||.|.
 Frog   548 RSCEDAVQSILQSQESFPPDLLEIFSSWQVEVALRGRPA---LGSRLVSASLFLRFLCPAILSPG 609

  Fly   670 LFDLTTERLDAQTSRTLTLISKTIQSLGNLVSSRSSQQTCKEEFTVELYKKFCT---EQHVDAVK 731
            ||:|:.|......:|.|||::|.:|:|.|.  :|..:   |||     |..|..   ||:.|.:.
 Frog   610 LFNLSAEHPQPLAARALTLVAKVLQNLANF--TRFGE---KEE-----YMGFMNGFLEQYGDGMS 664

  Fly   732 HFLEVISTPSHASSSVHPAAAAATPLEPVLLKEGLMTKYPTSRKRFGRQFKQRHFRLTTHSLSYA 796
            .||:.::.|   .|.|.|                  |:|.:|.                 .|:| 
 Frog   665 VFLQAVADP---ESEVSP------------------TRYESSA-----------------DLAY- 690

  Fly   797 KSKGKQPICDIPLQEIASVEQLKDKSFKMQNCFKIVHNDRSLIVQTTNCVEEREWFDLLHKICLM 861
                          |:|.:..:      :...|..||.      ||.:.:|...        .::
 Frog   691 --------------ELAVLHSM------LSGIFTGVHQ------QTKDQLEPLP--------TIL 721

  Fly   862 NSIRMQYFHPSAFVSGFYSCCGRSDENSPGCKKVLDKTMDYFQMDLVTALDPAL----DLQRIHT 922
            .::                     .|..|....:.:.| ||...|.... ||..    ||.::..
 Frog   722 KAL---------------------TEGQPVPASITEHT-DYDNRDEEND-DPVFVTPRDLSKLRP 763

  Fly   923 LI---MSNMSVLESLLDPLTYHQSLSQ--TQHQQHNPLVPLATDLQKHSPQAFAEFKRTIEKLRE 982
            |:   .|..|:|...|.|.|..:.|.:  .:|......|| |........:...|.|.|.:....
 Frog   764 LVNRSQSMSSLLRERLPPPTRSEFLEKKSRRHVTRTQSVP-AQGRAGRERRRVTEEKGTEDNTLL 827

  Fly   983 KAYAIDRDHRDYKQGITRQLKYGSRQAPI---GDDNYWHMMRAAGQLNQQHHQQQQHQQQ--QQQ 1042
            |...:.|        :........|::.:   .::|..|:.:.|.:...|..|.|:.:.|  :.|
 Frog   828 KIQKLPR--------VRPPSTLPRRKSTVPWCRNENIPHLGQGAEEAVNQEKQLQEMRGQILENQ 884

  Fly  1043 QQQQQLQ------QFQPQPVLPQMQNVR--AYPYQPATSNMNAYCLHNMQ-YQQQRLPFHQQQQQ 1098
            .:|:.|:      ..|.|.:|.|:..|.  ...:|...:...:..|:.:: .::::||......:
 Frog   885 GKQKDLEGQIGILSGQIQEMLGQLAKVEETQRTFQEEMAGQVSLILNRIKALEEKKLPKENSVAE 949

  Fly  1099 HHQQLQQQQSQFQPLRSHQLQRHNNNLNNNNCGNGSSSSPSSTTSSVVAAP 1149
            :..:..:.......:...|    .::.:.:|..||.:....::|||..:.|
 Frog   950 NPAENIEDNHLLAQINEEQ----KDSEDPSNICNGENDPEITSTSSESSLP 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RasGAP1NP_001261664.1 C2A_RasA2_RasA3 44..169 CDD:176046
C2B_RasA3 280..462 CDD:175977 47/302 (16%)
RasGAP 449..797 CDD:214617 98/369 (27%)
RasGAP_GAP1_like 473..740 CDD:213330 83/276 (30%)
PH 761..859 CDD:278594 13/97 (13%)
PH_GAP1-like 763..867 CDD:269950 13/103 (13%)
BTK 862..897 CDD:128417 2/34 (6%)
rasal3XP_002935455.2 PH-like 172..311 CDD:388408 25/151 (17%)
C2 288..417 CDD:387358 19/136 (14%)
RasGAP_DAB2IP 408..731 CDD:213338 105/439 (24%)
BexC_CtrB_KpsE <863..968 CDD:130083 17/104 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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