DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and CDK11B

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_011540792.1 Gene:CDK11B / 984 HGNCID:1729 Length:804 Species:Homo sapiens


Alignment Length:333 Identity:117/333 - (35%)
Similarity:189/333 - (56%) Gaps:47/333 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EGC----------KVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLREL 73
            :||          ::..||||.||:||.|:|.:  ..|||::    :..|..:::.|||..:.:.
Human   439 QGCRSVEEFQCLNRIEEGTYGVVYRAKDKKTDE--IVALKRLKMEKEKEGFPITSLREINTILKA 501

  Fly    74 KHQNVITLIRVFLSHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDG 138
            :|.|::|:..:.:..|..|::::::|.||||       ::...|.||..:| |.||:|:.|:|.|
Human   502 QHPNIVTVREIVVGSNMDKIYIVMNYVEHDL-------KSLMETMKQPFLP-GEVKTLMIQLLRG 558

  Fly   139 IHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPE 203
            :.:||.||:||||||.:|:|:    :..|.:|:.|.|.||.:.:|||...   |||||.||||||
Human   559 VKHLHDNWILHRDLKTSNLLL----SHAGILKVGDFGLAREYGSPLKAYT---PVVVTLWYRAPE 616

  Fly   204 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWE 268
            |||||:.|:.|:|:|::||||.||||.:|:|..:.|         .||::::|..:|.|.:|.|.
Human   617 LLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSE---------IDQINKVFKDLGTPSEKIWP 672

  Fly   269 DIKKMPEHHTLTKDFKRSTYSTCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNKRITSEQAMQDQ 333
            ...::|.       .|:.|:|........:|.......:.|.|:.|.|...|.:||::|..::.:
Human   673 GYSELPA-------VKKMTFSEHPYNNLRKRFGALLSDQGFDLMNKFLTYFPGRRISAEDGLKHE 730

  Fly   334 YFQEEPQP 341
            ||:|.|.|
Human   731 YFRETPLP 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 112/325 (34%)
CDK11BXP_011540792.1 STKc_CDC2L1 441..732 CDD:173741 111/323 (34%)

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