DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and CDC28

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_009718.3 Gene:CDC28 / 852457 SGDID:S000000364 Length:298 Species:Saccharomyces cerevisiae


Alignment Length:329 Identity:121/329 - (36%)
Similarity:174/329 - (52%) Gaps:44/329 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DLFNYEGC-KVGRGTYGHVYKAKWKETSDGKE-YALKQI----DGTGLSMSACREIALLRELKHQ 76
            :|.||:.. |||.||||.||||.......|:. .|||:|    :..|:..:|.|||:||:|||..
Yeast     4 ELANYKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDD 68

  Fly    77 NVITLIRVFLSHND-RKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIH 140
            |::.|..:.  |:| .|::|:.::.:.||      .|..:...|...:...:||..:.|:..||.
Yeast    69 NIVRLYDIV--HSDAHKLYLVFEFLDLDL------KRYMEGIPKDQPLGADIVKKFMMQLCKGIA 125

  Fly   141 YLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELL 205
            |.||:.:|||||||.|:|:..|||    :|:.|.|.||.|..||:....   .:||.||||||:|
Yeast   126 YCHSHRILHRDLKPQNLLINKDGN----LKLGDFGLARAFGVPLRAYTH---EIVTLWYRAPEVL 183

  Fly   206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDI 270
            ||.:.|:..:|.|:|||||||:...:|||         |.....||:.:||.|:|.|.:..|.||
Yeast   184 LGGKQYSTGVDTWSIGCIFAEMCNRKPIF---------SGDSEIDQIFKIFRVLGTPNEAIWPDI 239

  Fly   271 KKMPEHHTLTKDFKRSTYSTCSLAKYMERHKIKP--DSKAFHLLQKLLLMDPNKRITSEQAMQDQ 333
            ..:|:.......::|...|           ::.|  |.:...||.|||..||..||::.:|....
Yeast   240 VYLPDFKPSFPQWRRKDLS-----------QVVPSLDPRGIDLLDKLLAYDPINRISARRAAIHP 293

  Fly   334 YFQE 337
            ||||
Yeast   294 YFQE 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 117/324 (36%)
CDC28NP_009718.3 STKc_CDK1_CdkB_like 8..295 CDD:270829 115/321 (36%)

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