DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and CDKB2;1

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_177780.1 Gene:CDKB2;1 / 843987 AraportID:AT1G76540 Length:313 Species:Arabidopsis thaliana


Alignment Length:325 Identity:121/325 - (37%)
Similarity:184/325 - (56%) Gaps:44/325 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLREL-KHQNVITL--IR 83
            |||.||||.||:|:.|.|  ||..|||:.    |..|:..:..|||::||.| :..:|:.|  ::
plant    19 KVGEGTYGKVYRAREKAT--GKIVALKKTRLHEDEEGVPSTTLREISILRMLARDPHVVRLMDVK 81

  Fly    84 VFLSHNDRKV-FLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIHYLHSNWV 147
            ..||...:.| :|:.:|.:.|   :.||.|:.::|.|.  :|...:|||:||:..|:.:.|.:.:
plant    82 QGLSKEGKTVLYLVFEYMDTD---VKKFIRSFRSTGKN--IPTQTIKSLMYQLCKGMAFCHGHGI 141

  Fly   148 LHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARHYT 212
            |||||||.|:|:   ..:..|:||||:|.||.|..|:|....   .::|.||||||:||||.||:
plant   142 LHRDLKPHNLLM---DPKTMRLKIADLGLARAFTLPMKKYTH---EILTLWYRAPEVLLGATHYS 200

  Fly   213 KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDIKKMPEHH 277
            .|:|:|::|||||||:|::.||   |.|.:.      .||..||.:.|.|.::.|..:..:...|
plant   201 TAVDMWSVGCIFAELVTNQAIF---QGDSEL------QQLLHIFKLFGTPNEEMWPGVSTLKNWH 256

  Fly   278 TLTKDFKRSTYSTCSLAKYMERHKIKP--DSKAFHLLQKLLLMDPNKRITSEQAMQDQYFQEEPQ 340
            ...: :|.||.|:.           .|  |.....||.|:|..:|.|||:::.||:..||.:.|:
plant   257 EYPQ-WKPSTLSSA-----------VPNLDEAGVDLLSKMLQYEPAKRISAKMAMEHPYFDDLPE 309

  Fly   341  340
            plant   310  309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 118/318 (37%)
CDKB2;1NP_177780.1 Protein Kinases, catalytic domain 12..305 CDD:473864 119/319 (37%)

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