DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and CDKD1;1

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_177510.1 Gene:CDKD1;1 / 843704 AraportID:AT1G73690 Length:398 Species:Arabidopsis thaliana


Alignment Length:345 Identity:124/345 - (35%)
Similarity:181/345 - (52%) Gaps:50/345 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLRELKHQNVITLIRVFLS 87
            :|:||||.|:||  .:|.:|:..|:|:|    :..|::::|.|||.||:||||.::|.||..| .
plant    17 LGQGTYGVVFKA--TDTKNGETVAIKKIRLGKEKEGVNVTALREIKLLKELKHPHIIELIDAF-P 78

  Fly    88 HNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIHYLHSNWVLHRDL 152
            |.: .:.::.::.|.||..:|:        .:.:.:..|.|||.|..||.|:.|.|..||||||:
plant    79 HKE-NLHIVFEFMETDLEAVIR--------DRNLYLSPGDVKSYLQMILKGLEYCHGKWVLHRDM 134

  Fly   153 KPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDI 217
            ||.|:|:    ...|::|:||.|.||:|.:|.:....   .|...||||||||.||:.|..|:|:
plant   135 KPNNLLI----GPNGQLKLADFGLARIFGSPGRKFTH---QVFARWYRAPELLFGAKQYDGAVDV 192

  Fly   218 WAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDIKKMP---EHHTL 279
            ||.||||||||...| |.....||        |||.:||...|.|:...|.|:..:|   |:..:
plant   193 WAAGCIFAELLLRRP-FLQGNSDI--------DQLSKIFAAFGTPKADQWPDMICLPDYVEYQFV 248

  Fly   280 TKDFKRSTYSTCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNKRITSEQAMQDQYFQEEPQPTQD 344
            .....||...|.|             ..|..||.|:...||..||:.:||::.:||...|.||..
plant   249 PAPSLRSLLPTVS-------------EDALDLLSKMFTYDPKSRISIQQALKHRYFTSAPSPTDP 300

  Fly   345 VFAGCPIPYPKREFLTDDDQ 364
            :  ..|.|..|::..:.|.:
plant   301 L--KLPRPVSKQDAKSSDSK 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 115/314 (37%)
CDKD1;1NP_177510.1 STKc_CDK7 10..304 CDD:270833 120/329 (36%)

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