DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and CDKE;1

DIOPT Version :9

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_201166.1 Gene:CDKE;1 / 836481 AraportID:AT5G63610 Length:470 Species:Arabidopsis thaliana


Alignment Length:456 Identity:179/456 - (39%)
Similarity:252/456 - (55%) Gaps:78/456 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FNYEGCKVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLRELKHQNVIT 80
            :|..| |:|.||||.|:.|:.| |...:..|:|:.    ||.|:|.:|.|||.||||:.|:||:.
plant    25 YNLVG-KIGEGTYGLVFLARTK-TPPKRPIAIKKFKQSKDGDGVSPTAIREIMLLREISHENVVK 87

  Fly    81 LIRVFLSHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIHYLHSN 145
            |:.|.::..|..::|..||||:||:.||:.||...........    |||||:|:|:|::|||||
plant    88 LVNVHINFADMSLYLAFDYAEYDLYEIIRHHRDKVGHSLNTYT----VKSLLWQLLNGLNYLHSN 148

  Fly   146 WVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARH 210
            |::||||||:|||||||..|.|.|||||.|.||::.||||||:| :.||||.||||||||||::|
plant   149 WIIHRDLKPSNILVMGDAEEHGIVKIADFGLARIYQAPLKPLSD-NGVVVTIWYRAPELLLGSKH 212

  Fly   211 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS-NPYHHDQLDRIFNVMGFPQDKDWEDIKKMP 274
            ||.|:|:||:|||||||||.:|:|  :..:.|:| ||:..||||:||.::|.|....|..:..:|
plant   213 YTSAVDMWAVGCIFAELLTLKPLF--QGAEAKSSQNPFQLDQLDKIFKILGHPTMDKWPTLVNLP 275

  Fly   275 EHHTLTKDFKRSTYSTCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNKRITSEQAMQDQYFQEEP 339
            ......:..:...|.:..|...:..::..|   |:.||.|:|..||.||||:.||::.:||:.:|
plant   276 HWQNDVQHIQAHKYDSVGLHNVVHLNQKSP---AYDLLSKMLEYDPLKRITASQALEHEYFRMDP 337

  Fly   340 QPTQDVF-AGCP----IPYPKREFLTDDDQEDKSD------------------------------ 369
            .|.::.| |..|    :.||.|...|:.|.|..:.                              
plant   338 LPGRNAFVASQPMEKNVNYPTRPVDTNTDFEGTTSINPPQAVAAGNVAGNMAGAHGMGSRSMPRP 402

  Fly   370 ---NKRQQQQQQQ-------------------QQQQQQQQQQQQQQQQQQQQQMN----AEPNAK 408
               :..|:.||.|                   |||:...|..||||.:::...|.    |.||..
plant   403 MVAHNMQRMQQSQGMMAYNFPAQAGLNPSVPLQQQRGMAQPHQQQQLRRKDPGMGMSGYAPPNKS 467

  Fly   409 R 409
            |
plant   468 R 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 149/319 (47%)
S_TKc 22..335 CDD:214567 148/317 (47%)
CDKE;1NP_201166.1 STKc_CDK8_like 24..333 CDD:270834 149/319 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 284 1.000 Domainoid score I385
eggNOG 1 0.900 - - E1_KOG0666
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I802
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D642369at2759
OrthoFinder 1 1.000 - - FOG0002084
OrthoInspector 1 1.000 - - oto4081
orthoMCL 1 0.900 - - OOG6_102974
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1379
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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