DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and AT5G63370

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_201142.1 Gene:AT5G63370 / 836456 AraportID:AT5G63370 Length:612 Species:Arabidopsis thaliana


Alignment Length:350 Identity:122/350 - (34%)
Similarity:185/350 - (52%) Gaps:58/350 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KVGRGTYGHVYKAKWKETSDGKE-YALKQI--------DGTGLSMSACREIALLRELKHQNVITL 81
            |:..||||.||||:.::|   || .|||:|        :..|..:::.|||.:|....|..::.:
plant   302 KINEGTYGIVYKARDEKT---KEIVALKKIKMKEDRFEEEYGFPLTSLREINILLSCNHPAIVNV 363

  Fly    82 IRVFL-SHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIHYLHSN 145
            ..|.: ..||..|::::::.||||..::...:...:|.:        ||.|:.|:|||:.|||:|
plant   364 KEVVVGGKNDNDVYMVMEHLEHDLRGVMDRRKEPFSTSE--------VKCLMMQLLDGLKYLHTN 420

  Fly   146 WVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARH 210
            |::||||||:|:|:    |..|.:||.|.|.||.:.:|:||...:   |:|.|||.|||||||:.
plant   421 WIIHRDLKPSNLLM----NNCGELKICDFGMARQYGSPIKPYTQM---VITQWYRPPELLLGAKE 478

  Fly   211 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDIKKMPE 275
            |:.|:|:|::|||.||||:.:|:|..:.|         .|||.:||.|:|.|.:..|......|.
plant   479 YSTAVDMWSVGCIMAELLSQKPLFPGKSE---------LDQLQKIFAVLGTPNEAIWPGFSSFPN 534

  Fly   276 ---------HHTLTKDFKRSTYSTCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNKRITSEQAMQ 331
                     ::.|.|.|...::....:.          ..:.|.||..||.:||.||:|.|.|:.
plant   535 AKAKFPTQPYNMLRKKFPAISFVGGQIL----------SERGFDLLNSLLTLDPEKRLTVEDALN 589

  Fly   332 DQYFQEEPQPTQDVFAGCPIPYPKR 356
            ..:|.|.|.|....|  .|...|||
plant   590 HGWFHEVPLPKSKDF--MPTYPPKR 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 113/327 (35%)
AT5G63370NP_201142.1 STKc_CDC2L1 292..593 CDD:173741 113/327 (35%)

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