DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and AT3G01085

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001325617.1 Gene:AT3G01085 / 821283 AraportID:AT3G01085 Length:631 Species:Arabidopsis thaliana


Alignment Length:383 Identity:124/383 - (32%)
Similarity:192/383 - (50%) Gaps:70/383 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KVEDLFNYEGCKVGRGTYGHVYKAKWKETSDGKEYALKQI-----DGTGLSMSACREIALLRELK 74
            :.||....|  |:|:|||.:|::|  .|.|.|:..|||:|     :...:...| |||.:||.|.
plant   111 RAEDFEKRE--KIGQGTYSNVFRA--CEVSTGRVMALKKIRIQNFETENIRFIA-REIMILRRLD 170

  Fly    75 HQNVITLIRVFLSHNDRKVFLLIDYAEHDLWHI-----IKFHRAAKATKKQVVVPRGMVKSLLYQ 134
            |.|::.|..:..|.|...::.:.||.||||..:     |||..|             .:|..:.|
plant   171 HPNIMKLEGIIASRNSNSMYFVFDYMEHDLEGLCSSPDIKFTEA-------------QIKCYMKQ 222

  Fly   135 ILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWY 199
            :|.|:.:.|...::|||:|.|||||    |.:|.:|:||.|.|.:.....|  ..|...|||.||
plant   223 LLWGVEHCHLRGIMHRDIKAANILV----NNKGVLKLADFGLANIVTPRNK--NQLTSRVVTLWY 281

  Fly   200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQD 264
            ||||||:|:..|:.::|:|::||:|||:||..|:...|.|         .:||.:|:.:.|.|.:
plant   282 RAPELLMGSTSYSVSVDLWSVGCVFAEILTGRPLLKGRTE---------IEQLHKIYKLSGSPDE 337

  Fly   265 KDWEDIKKMPEHHTLTKDFK-RSTYSTCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNKRITSEQ 328
            :.||..|..|:    ||.|: :..|..|...::.|..|     .|.:||:.||.:||.||.|:..
plant   338 EFWEKNKLHPQ----TKMFRPQHQYEGCLRERFDEFPK-----TAINLLENLLSIDPEKRGTASS 393

  Fly   329 AMQDQYFQEEPQPTQDVFAGCPIPYPKREFLTDDDQEDKSDNKRQQQQQQQQQQQQQQ 386
            |:..:||..:|      :|..|...||           ...||....:.:::.|::::
plant   394 ALMSEYFNTQP------YACDPSTLPK-----------YPPNKEMDAKYREELQRRRR 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 112/326 (34%)
AT3G01085NP_001325617.1 STKc_CDK9_like 115..400 CDD:270832 112/326 (34%)

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