DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and cdk10

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001017622.2 Gene:cdk10 / 550285 ZFINID:ZDB-GENE-050417-94 Length:360 Species:Danio rerio


Alignment Length:368 Identity:120/368 - (32%)
Similarity:190/368 - (51%) Gaps:61/368 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLRELKHQNVITLIRVFL 86
            ::|.||||.||:|  ::|...:..|||::    :..|:.:|:.|||.||..|:|.|::.|..|.:
Zfish    45 RIGEGTYGIVYRA--RDTRTNEIVALKKVRMDKEKDGIPISSLREINLLIRLRHPNIVELKEVVV 107

  Fly    87 SHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIHYLHSNWVLHRD 151
            ..:...:||::.|.|.||        |:.....|.......||.::.|:|.|:.|||.|::||||
Zfish   108 GSHLESLFLVMSYCEQDL--------ASLLENMQSPFSEAQVKCIVLQLLKGLAYLHHNFILHRD 164

  Fly   152 LKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARHYTKAID 216
            ||.:|:|:    .::|.|||||.|.||::..||:|:.   |.|||.||||||||||.:..|.|:|
Zfish   165 LKVSNLLM----TDKGCVKIADFGLARVYGIPLQPMT---PRVVTLWYRAPELLLGTKTQTTALD 222

  Fly   217 IWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDIKKMPEHHTLTK 281
            :||:||||||||..:|:.....|         ..|||.|..::|.|.:..|....::|    |..
Zfish   223 MWAVGCIFAELLAHKPLLPGASE---------IQQLDLIVQLLGTPNESIWPGFSRLP----LVG 274

  Fly   282 DF--KRSTYSTCSLAKYMERHKIKPDSKA-FHLLQKLLLMDPNKRITSEQAMQDQYFQEEPQPTQ 343
            .:  ::..|:..       ::|....|:| ..||..|.:.:|.:|.|:...::..||:|:|.|.:
Zfish   275 QYSLRKQPYNNL-------KNKFTWLSEAGLRLLNLLFMYNPQRRATAIDCLESSYFKEKPLPCE 332

  Fly   344 DVFAGCPIP-YPKREFLTDDDQEDKSDNKRQQQQQQQQQQQQQ 385
            ...    :| :|...            |||...:.:.|.::.:
Zfish   333 PEL----MPTFPHHR------------NKRSASETEHQTKRSK 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 109/315 (35%)
cdk10NP_001017622.2 STKc_CDK10 32..340 CDD:173742 115/335 (34%)

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