DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and Cdk1

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_062169.1 Gene:Cdk1 / 54237 RGDID:2319 Length:297 Species:Rattus norvegicus


Alignment Length:335 Identity:123/335 - (36%)
Similarity:188/335 - (56%) Gaps:59/335 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VEDLFNYEGCKVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLRELKHQ 76
            :||....|  |:|.||||.|||.:.:.|  |:..|:|:|    :..|:..:|.|||:||:||:|.
  Rat     1 MEDYIKIE--KIGEGTYGVVYKGRHRTT--GQIVAMKKIRLESEEEGVPSTAIREISLLKELRHP 61

  Fly    77 NVITLIRVFLSHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQV-VVPRG------MVKSLLYQ 134
            |:::|..|.:  .|.:::|:.::...||             ||.: .:|.|      :|||.|||
  Rat    62 NIVSLQDVLM--QDSRLYLIFEFLSMDL-------------KKYLDSIPPGQFMDSSLVKSYLYQ 111

  Fly   135 ILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWY 199
            ||.||.:.||..||||||||.|:|:    :::|.:|:||.|.||.|..|::....   .|||.||
  Rat   112 ILQGIVFCHSRRVLHRDLKPQNLLI----DDKGTIKLADFGLARAFGIPIRVYTH---EVVTLWY 169

  Fly   200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQD 264
            |:||:|||:..|:..:|||:||.|||||.|.:|:||...|         .|||.|||..:|.|.:
  Rat   170 RSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSE---------IDQLFRIFRALGTPNN 225

  Fly   265 KDWEDIKKMPEHHTLTKDFKRS--TYSTCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNKRITSE 327
            :.|.:::.:       :|:|.:  .:...|||.:::    ..|.....||.|:|:.||.|||:.:
  Rat   226 EVWPEVESL-------QDYKNTFPKWKPGSLASHVK----NLDENGLDLLSKMLVYDPAKRISGK 279

  Fly   328 QAMQDQYFQE 337
            .|::..||.:
  Rat   280 MALKHPYFDD 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 119/328 (36%)
Cdk1NP_062169.1 STKc_CDK1_euk 3..287 CDD:270845 120/329 (36%)

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