DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and Cdk8

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001102531.1 Gene:Cdk8 / 498140 RGDID:1560888 Length:464 Species:Rattus norvegicus


Alignment Length:412 Identity:325/412 - (78%)
Similarity:352/412 - (85%) Gaps:6/412 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDYDFKMKTQIERTKVEDLFNYEGCKVGRGTYGHVYKAKWKETSDGKEYALKQIDGTGLSMSACR 65
            ||||||:|...||.:|||||.||||||||||||||||||.|:..|.|:||||||:|||:||||||
  Rat     1 MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR 65

  Fly    66 EIALLRELKHQNVITLIRVFLSHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKS 130
            ||||||||||.|||:|.:|||||.||||:||.||||||||||||||||:||.||.|.:|||||||
  Rat    66 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKS 130

  Fly   131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVV 195
            |||||||||||||:|||||||||||||||||:|.|||||||||||||||||:|||||||||||||
  Rat   131 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV 195

  Fly   196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 260

  Fly   261 FPQDKDWEDIKKMPEHHTLTKDFKRSTYSTCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNKRIT 325
            ||.|||||||||||||.||.|||:|:||:.|||.||||:||:||||||||||||||.|||.||||
  Rat   261 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT 325

  Fly   326 SEQAMQDQYFQEEPQPTQDVFAGCPIPYPKREFLTDDDQEDKSDNKRQQQQQQQQQQQQQQQQQQ 390
            |||||||.||.|:|.||.||||||.||||||||||:::.::|.|.|.|||||.............
  Rat   326 SEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDEKGDKKNQQQQQGNNHTNGTGHPGN 390

  Fly   391 QQQQQQQQQQMNAEPNAKRVRL 412
            |.....|      .|..|:||:
  Rat   391 QDSGHAQ------GPPLKKVRV 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 277/315 (88%)
Cdk8NP_001102531.1 STKc_CDK8 3..335 CDD:270851 287/331 (87%)

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