DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and cdk2

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_998571.1 Gene:cdk2 / 406715 ZFINID:ZDB-GENE-040426-2741 Length:298 Species:Danio rerio


Alignment Length:333 Identity:123/333 - (36%)
Similarity:183/333 - (54%) Gaps:52/333 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KVEDLFNYEGCKVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLRELKH 75
            |||        |:|.||||.|||||.|.|  |:..|||:|    :..|:..:|.|||:||:||.|
Zfish     6 KVE--------KIGEGTYGVVYKAKNKVT--GETVALKKIRLDTETEGVPSTAIREISLLKELNH 60

  Fly    76 QNVITLIRVFLSHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIH 140
            .|::.|..|.  |.:.|::|:.::...||...:.     ..:...:.:|  :|||.|:|:|.|:.
Zfish    61 PNIVKLRDVI--HTENKLYLVFEFLHQDLKRFMD-----STSVSGISLP--LVKSYLFQLLQGLA 116

  Fly   141 YLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELL 205
            :.||:.||||||||.|:|:    |.:|.:|:||.|.||.|..|::....   .|||.||||||:|
Zfish   117 FCHSHRVLHRDLKPQNLLI----NAQGEIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEIL 174

  Fly   206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDI 270
            ||.::|:.|:|||::||||||::|...:|....|         .|||.|||..:|.|.:..|..:
Zfish   175 LGCKYYSTAVDIWSLGCIFAEMITRRALFPGDSE---------IDQLFRIFRTLGTPDESIWPGV 230

  Fly   271 KKMPEHHTLTKDFKRSTYSTCSLAKYMERHKIKP--DSKAFHLLQKLLLMDPNKRITSEQAMQDQ 333
            ..||::......:.|...|           |:.|  |.....||.::|..||||||:::.|:..:
Zfish   231 TSMPDYKPSFPKWARQDLS-----------KVVPPLDEDGRDLLGQMLTYDPNKRISAKNALVHR 284

  Fly   334 YFQEEPQP 341
            :|::...|
Zfish   285 FFRDVTMP 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 118/321 (37%)
cdk2NP_998571.1 STKc_CDK2_3 3..286 CDD:270844 121/325 (37%)

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