DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and cdk1

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_988908.1 Gene:cdk1 / 394503 XenbaseID:XB-GENE-482750 Length:302 Species:Xenopus tropicalis


Alignment Length:338 Identity:122/338 - (36%)
Similarity:183/338 - (54%) Gaps:63/338 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ERTKVEDLFNYEGCKVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLRE 72
            |.||:|        |:|.||||.|||.:.|.|  |:..|:|:|    :..|:..:|.|||:||:|
 Frog     3 EYTKIE--------KIGEGTYGVVYKGRHKAT--GQVVAMKKIRLENEEEGVPSTAIREISLLKE 57

  Fly    73 LKHQNVITLIRVFLSHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQV-VVPRG------MVKS 130
            |:|.|::.|:.|.:  .|.:::|:.::...||             ||.: .:|.|      :|||
 Frog    58 LQHPNIVCLLDVLM--QDSRLYLIFEFLSMDL-------------KKYLDSIPSGQYIDTMLVKS 107

  Fly   131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVV 195
            .|||||.||.:.||..||||||||.|:|:    :.:|.:|:||.|.||.|..|::....   .||
 Frog   108 YLYQILQGIVFCHSRRVLHRDLKPQNLLI----DSKGVIKLADFGLARAFGIPVRVYTH---EVV 165

  Fly   196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 260
            |.||||||:|||:..|:..:|:|:||.||||:.|.:|:||...|         .|||.|||..:|
 Frog   166 TLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIATKKPLFHGDSE---------IDQLFRIFRALG 221

  Fly   261 FPQDKDWEDIKKMPEHHTLTKDFKRSTYSTCSLAKYMERHKIKP-DSKAFHLLQKLLLMDPNKRI 324
            .|.::.|.:::.:.::......:|....|.          .:|. |.....||.|:|:.||.|||
 Frog   222 TPNNEVWPEVESLQDYKNTFPKWKGGNLSA----------NVKNIDKDGLDLLSKMLIYDPAKRI 276

  Fly   325 TSEQAMQDQYFQE 337
            ::.:|:...||.:
 Frog   277 SARKALLHPYFDD 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 116/327 (35%)
cdk1NP_988908.1 STKc_CDK1_euk 3..287 CDD:270845 120/334 (36%)

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