DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and Cdk2

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001424913.1 Gene:Cdk2 / 362817 RGDID:70486 Length:346 Species:Rattus norvegicus


Alignment Length:379 Identity:131/379 - (34%)
Similarity:188/379 - (49%) Gaps:96/379 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KVEDLFNYEGCKVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLRELKH 75
            |||        |:|.||||.|||||.|.|  |:..|||:|    :..|:..:|.|||:||:||.|
  Rat     6 KVE--------KIGEGTYGVVYKAKNKLT--GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60

  Fly    76 QNVITLIRVFLSHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIH 140
            .|::.|:.|.  |.:.|::|:.::...||   .||..|:..|.    :|..::||.|:|:|.|:.
  Rat    61 PNIVKLLDVI--HTENKLYLVFEFLHQDL---KKFMDASALTG----IPLPLIKSYLFQLLQGLA 116

  Fly   141 YLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELL 205
            :.||:.||||||||.|:|:    |..|.:|:||.|.||.|..|::....   .|||.||||||:|
  Rat   117 FCHSHRVLHRDLKPQNLLI----NAEGSIKLADFGLARAFGVPVRTYTH---EVVTLWYRAPEIL 174

  Fly   206 LGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQEDIK-------------------------- 242
            ||.::|:.|:|||::||||||:       |  |.|...|                          
  Rat   175 LGCKYYSTAVDIWSLGCIFAEM-------HLVCTQHHAKCCGEHRRNGRHSLCPLCSYLEVAASQ 232

  Fly   243 ------TSNPY------------HHDQLDRIFNVMGFPQDKDWEDIKKMPEHHTLTKDFKRSTYS 289
                  .|.||            ..|||.|||..:|.|.:..|..:..||::......:.|..:|
  Rat   233 GGGMTAVSTPYPVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 297

  Fly   290 TCSLAKYMERHKIKP--DSKAFHLLQKLLLMDPNKRITSEQAMQDQYFQEEPQP 341
                       |:.|  |.....||.::|..||||||:::.|:...:||:..:|
  Rat   298 -----------KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 125/367 (34%)
Cdk2NP_001424913.1 None

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