DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and CG7236

DIOPT Version :9

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_608950.3 Gene:CG7236 / 33798 FlyBaseID:FBgn0031730 Length:438 Species:Drosophila melanogaster


Alignment Length:437 Identity:128/437 - (29%)
Similarity:187/437 - (42%) Gaps:102/437 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLRELKHQNVITLIRVFL 86
            ::|.|:||.|||.:.:||  |...|:|:.    |...:...|.|||.||:.|||.|:::|:.|| 
  Fly    55 RLGEGSYGVVYKCRDRET--GALVAVKRFVESEDDPAIRKIALREIRLLKNLKHPNLVSLLEVF- 116

  Fly    87 SHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIHYLHSNWVLHRD 151
             ...|::.|:.::.|..:.|.::.|...        .|..:.|.:.||.|.|:.|.|....||||
  Fly   117 -RRKRRLHLVFEFCELTVLHELERHPQG--------CPEHLTKQICYQTLLGVAYCHKQGCLHRD 172

  Fly   152 LKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARHYTKAID 216
            :||.|||:    ..:|:||:.|.||||:    |.|..:....|.|.||||||||:|...|...:|
  Fly   173 IKPENILL----TAQGQVKLCDFGFARM----LSPGENYTDYVATRWYRAPELLVGDTQYGTPVD 229

  Fly   217 IWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG---------FPQDKDWEDI-- 270
            :|||||:||||:..|.::..| .|:        |||..|...:|         |.|::.::.|  
  Fly   230 VWAIGCLFAELVRGEALWPGR-SDV--------DQLYLIRKTLGDLLPRHIQIFGQNEYFKGITL 285

  Fly   271 ----------KKMP---EHHTLTKDFKRSTYSTCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNK 322
                      .|||   :.:.||.||                            |:|.|..||.|
  Fly   286 PVPPTLEPLEDKMPAKSQQNPLTIDF----------------------------LKKCLDKDPTK 322

  Fly   323 RITSEQAMQDQYFQEEPQPTQDVFAGCPIPYPKREFLTDDDQEDKSDNKRQQQQQQQQQQQQQQQ 387
            |.:.|:..:..||.:               |..::...:.....::.|.||||...||.......
  Fly   323 RWSCEKLTKHSYFDD---------------YIAKQRELEHVNSLEAANLRQQQLASQQFMLATAA 372

  Fly   388 QQQQQQQQQQQQQMNAEPNAK--RVRLSGAGNQQDFHHQQQQQQQQQ 432
            ||.|....|......|...:|  ...|....:.|..||..|...:.|
  Fly   373 QQLQTGPAQAAAIAAARDKSKTSNTSLPLLPSTQHHHHPHQDYVKLQ 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 106/336 (32%)
S_TKc 22..335 CDD:214567 106/336 (32%)
CG7236NP_608950.3 STKc_CDKL1_4 48..335 CDD:270837 106/336 (32%)
Pkinase 50..335 CDD:278497 106/336 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442417
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24056
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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