DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk8 and cdk-11.2

DIOPT Version :10

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_509746.2 Gene:cdk-11.2 / 181247 WormBaseID:WBGene00013917 Length:668 Species:Caenorhabditis elegans


Alignment Length:427 Identity:123/427 - (28%)
Similarity:208/427 - (48%) Gaps:79/427 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KMKTQIERTKVEDLFNY----EGCK----------VGRGTYGHVYKAKWKETSDGKEYALKQI-- 54
            |.:.|..|..|..|..|    .||:          :..||||.|::.  |.|...:..|||:.  
 Worm   275 KRREQRHREAVSKLPVYYPGLRGCQHISEYVILNVIAEGTYGEVFRG--KNTRTDEVVALKRFKM 337

  Fly    55 --DGTGLSMSACREI-ALLRELKHQNVITLIRVFLSHNDRKVFLLIDYAEHDLWHIIKFHRAAKA 116
              :..|..::|.||| .||:...|:|::.:..:.:.....:|::.::|.|||:..:|...|:...
 Worm   338 EKEKEGFPITALREINMLLKAGAHENIVNVKEILVGSTKTEVYMAMEYVEHDVKSLIDKMRSRNQ 402

  Fly   117 TKKQVVVPRGMVKSLLYQILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFN 181
            ..|     .|..|:|:.|:|.||.::|..|:||||||.:|:|:    :..|.:||||.|.||.:.
 Worm   403 RFK-----TGQQKTLMSQLLSGIEHMHKLWILHRDLKTSNLLI----SHSGILKIADFGLAREYG 458

  Fly   182 --APLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 244
              ..::....|.|:|||.|||:|||||..:.|:..:|:|:||||.||.:..:|:|   |.|   |
 Worm   459 EARDIEKRMKLTPIVVTLWYRSPELLLEPKTYSTPVDMWSIGCIMAEFIMMKPMF---QGD---S 517

  Fly   245 NPYHHDQLDRIFNVMGFPQDKDWEDIKKMPEHHTLTKDFKRSTYSTCSLAKYMERHKIKP----- 304
            .|   :|:.:||.:||.|.::.|.|||::                  .:...:|...:||     
 Worm   518 EP---NQVHQIFQMMGTPTEQIWPDIKEL------------------KVWNMVEFPPVKPGQLRR 561

  Fly   305 --------DSKAFHLLQKLLLMDPNKRITSEQAMQDQYFQEEPQ--PTQDVFAGCPIPYPKREFL 359
                    :...|.||..:|.::|..|:|:.:|:|..:|.|.|:  |.:|:    |: ||.:..|
 Worm   562 IFKGEKLVNETGFDLLNGMLCLNPANRLTASEALQHDWFSEHPKAVPPEDL----PV-YPAKSEL 621

  Fly   360 TDDDQEDKSDNKRQQQQQQQQQQQQQQQQQQQQQQQQ 396
            .....|::..|:.:.....::.::....:|...:.:|
 Worm   622 NAAPPENRRKNRLEALLADEEPERAALLRQFNVKAEQ 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 106/349 (30%)
cdk-11.2NP_509746.2 Protein Kinases, catalytic domain 298..600 CDD:473864 103/339 (30%)

Return to query results.
Submit another query.