DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk8 and cdk19

DIOPT Version :9

Sequence 1:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001107512.1 Gene:cdk19 / 100135368 XenbaseID:XB-GENE-989176 Length:491 Species:Xenopus tropicalis


Alignment Length:484 Identity:334/484 - (69%)
Similarity:375/484 - (77%) Gaps:33/484 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDYDFKMKTQIERTKVEDLFNYEGCKVGRGTYGHVYKAKWKETSDGKEYALKQIDGTGLSMSACR 65
            |||:||.|...||.|||:||.||||||||||||||||||.|:..|.||||||||:|||:||||||
 Frog     1 MDYEFKSKLSAEREKVEELFEYEGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACR 65

  Fly    66 EIALLRELKHQNVITLIRVFLSHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKS 130
            ||||||||||.|||.|.:|||||:||||:||.||||||||||||||||:||.||.:.:||.||||
 Frog    66 EIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKS 130

  Fly   131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVV 195
            |||||||||||||:|||||||||||||||||:|.|||||||||||||||||:|||||||||||||
 Frog   131 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV 195

  Fly   196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||:|||
 Frog   196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 260

  Fly   261 FPQDKDWEDIKKMPEHHTLTKDFKRSTYSTCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNKRIT 325
            ||.|||||||:||||:.||.|||:|:||:..||.||||:||:|||||.|.||||||.|||.||||
 Frog   261 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRIT 325

  Fly   326 SEQAMQDQYFQEEPQPTQDVFAGCPIPYPKREFLTDDDQEDKSDNKRQQQQQQQQQQQQQQQQQQ 390
            |:||:||.||||:|.||.||||||.|||||||||.:|:.|:|::..:|.|.|.|||...|||...
 Frog   326 SDQALQDLYFQEDPLPTSDVFAGCQIPYPKREFLNEDEPEEKTEKNQQTQNQHQQQTATQQQTTV 390

  Fly   391 QQQQQQQQ---------------------QQMNAEPNAKRVRLSGAGNQ--------QDFHHQQQ 426
            ||||.|||                     ..:|..|..|:.|:..:.|.        .|:.|...
 Frog   391 QQQQVQQQNSSQTNGTGGTAGAALQHSQDSSLNQGPQNKKPRMGPSANNSGGPSLMPSDYQHSSS 455

  Fly   427 Q--QQQQQQQQQQQQQQMMFN--QQQNFQ 451
            :  .|...|...|.|..|.::  .||:.|
 Frog   456 RLGYQSNVQGSSQPQNAMGYSTTSQQSSQ 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 267/315 (85%)
S_TKc 22..335 CDD:214567 265/312 (85%)
cdk19NP_001107512.1 PKc_like 18..335 CDD:389743 267/316 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 564 1.000 Domainoid score I233
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 670 1.000 Inparanoid score I739
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D287471at33208
OrthoFinder 1 1.000 - - FOG0002084
OrthoInspector 1 1.000 - - otm47443
Panther 1 1.100 - - O PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1379
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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