DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43897 and Smpd1

DIOPT Version :9

Sequence 1:NP_001261659.1 Gene:CG43897 / 39153 FlyBaseID:FBgn0264489 Length:1385 Species:Drosophila melanogaster
Sequence 2:NP_001006998.1 Gene:Smpd1 / 308909 RGDID:1549719 Length:627 Species:Rattus norvegicus


Alignment Length:442 Identity:80/442 - (18%)
Similarity:134/442 - (30%) Gaps:160/442 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   825 DLTKDADAVEETERSCGHGDSSVYCPVC--------DEMRCSPNTWGKLNKADQWRIANLHNEPL 881
            ||..|.|.:|.|:.:|..       |:|        ...|.....||:.:|.|.         ||
  Rat   204 DLHWDHDYLEGTDPNCAD-------PLCCRRGSGWPPNSRTGAGYWGEYSKCDL---------PL 252

  Fly   882 KNYKATYEIRSP-------YISRQISWEDM-QSAKENVPPEKLQRQRSFVEIV--------TTPA 930
            :..::..:...|       |.:..|...|: |.:::    ::|:...:..::|        ..||
  Rat   253 RTLESLLKGLGPAGPFEMVYWTGDIPAHDVWQQSRQ----DQLRALNTITDLVWKFLGPVPVYPA 313

  Fly   931 T---ESPPPSTPPPPPPPPPRQLALQKPETEVTWERSRSPSPLPSRKYPAPLIEAPQRSSSPYGL 992
            .   ||.|.:..|||         ..|......|                 |.||..::..|:  
  Rat   314 VGNHESTPVNGFPPP---------FIKGNQSSQW-----------------LYEAMAKAWEPW-- 350

  Fly   993 NPVQTKAPPSPVNLPAKFTHVPQLEG----------------------HNIGLLVKTATEPLQQS 1035
                         |||...|..::.|                      .|..||: .:|:|..|.
  Rat   351 -------------LPADALHTLRIGGFYALTPRPGLRLISLNMNFCSRENFWLLI-NSTDPAGQL 401

  Fly  1036 MSASSTMLAA------------TPPRSAAQPTPFEFPSLEQAEEQ------------HKFKSLAS 1076
            ......:.||            .||....:...:.:..:....|.            .:|:....
  Rat   402 QWLVDELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYD 466

  Fly  1077 FDEVQRDFGV------NRSFDNVSP--RPYLGIEGYKRVAWPPASEERIIREFTPQPQTQSPAPG 1133
            .:.:.|...|      ..:|.|::|  |.| .|:|    .:|.:|...:..|......||:.|||
  Rat   467 EETLSRPLAVAFLGPSATTFINLNPGYRVY-QIDG----NYPGSSHVVLDHETYILNLTQANAPG 526

  Fly  1134 AGGYYPQAHAPTAAAAAPPQQQYGAPSYDGQQPGAQWQQQQQQQQVPQQQYQ 1185
            .        .|:.......::.||.|.   ..| |.|.....:.:..:|.:|
  Rat   527 G--------TPSWKRLYRARETYGLPD---AMP-ASWHNLVYRMRADEQLFQ 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43897NP_001261659.1 DUF4749 7..108 CDD:292558
Smpd1NP_001006998.1 SapB 85..158 CDD:214797
MPP_ASMase 199..494 CDD:277321 59/351 (17%)
Metallophos 252..459 CDD:278574 38/252 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3770
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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