DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zasp67 and Pdlim5

DIOPT Version :10

Sequence 1:NP_648358.2 Gene:Zasp67 / 39148 FlyBaseID:FBgn0036044 Length:730 Species:Drosophila melanogaster
Sequence 2:XP_006233474.1 Gene:Pdlim5 / 64353 RGDID:621076 Length:624 Species:Rattus norvegicus


Alignment Length:505 Identity:108/505 - (21%)
Similarity:176/505 - (34%) Gaps:153/505 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PWGFRLVGGADYDYPLTVVKVTEGSIADEAGLRVEDIIVRINDTAATPLTHDEAHRLIMG-SGSV 77
            ||||||.||.|::.|||:..:.:|..|.:|.:|:.|:::.|:..:|..:||.||...|.. :||:
  Rat    13 PWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSL 77

  Fly    78 FYFGVYRENEEDAYECLKKFPTS--EGSLTKSPMPTISPSP--TPSLSQLTETTN-ARTPEPEPF 137
                  ....:.|....|..|.:  :|    .|...:.|.|  :|::|::|.||| |....|.||
  Rat    78 ------NMTLQRASAAAKSEPVAVQKG----EPKEVVKPVPITSPAVSKVTSTTNMAYNKVPRPF 132

  Fly   138 ----------VPLPRE-----------------LAAAT-------------------------MA 150
                      :|.|..                 :||.|                         ..
  Rat   133 GSVSSPKVTSIPSPSSAFTPAHAATSSHASPPPVAAVTPPPLSASGLHASANPSAAQCSSPPNTG 197

  Fly   151 APAVEVD-----VDVLAECRQPMSEVHSEEKRGDV---NGHDAPGQADEGGLPVENLYLPDLPDR 207
            .|||.|.     ..|.:|..|.::|......:||:   ||:  ||          .:.:|  |.|
  Rat   198 KPAVHVPRQPTVTSVCSESAQELAEGQRRGSQGDIKQQNGN--PG----------TVKIP--PKR 248

  Fly   208 PCSALSERQEIKLVEEEIAAVLSGESEVLKEHNVLGVNFYRIFPKPGVCMSSDVLRSLNEEVTKT 272
            |     .|:.|  ||.                   ...||.|              ..:.:.:|.
  Rat   249 P-----PRKHI--VER-------------------NTEFYHI--------------PTHSDASKK 273

  Fly   273 KLEKDKENRQWSTFLQRPNRPVPKSKQSLEAERRAANAYKVTIVKSAPREKSPMPEAKPAP-KEA 336
            :|.:|.|:  |        ||...:.|| .:.|..|.......:|.:..:.:....:.|.| :::
  Rat   274 RLIEDTED--W--------RPRTGTTQS-RSFRILAQITGTEHLKESENDNAKKANSTPEPSQQS 327

  Fly   337 TPPKEVEKKEEEPVPEEVVEPEPEPEKDEEPLPTDSEVPNLEQLPETELPDEQPEKSDAPKEVCE 401
            ..|....:..|.|.....|..........:|:.:.|     .:.|..:.|::.........:|..
  Rat   328 ASPLSAAESLESPGSNRPVVAGLRSAAAFKPVGSTS-----VKSPSWQRPNQAGTSMRKCGDVRS 387

  Fly   402 PEVVIQTEPGSPD----GNEASDGPAGATPPAEPITPVPVKSEEELALER 447
            ....|.....:|.    .|.||....||  |.:|....|..|:::..::|
  Rat   388 QHTQICFGSKAPSTGRISNSASSSGTGA--PMKPAVGPPQPSDQDTLVQR 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp67NP_648358.2 PDZ_ZASP52-like 4..84 CDD:467281 26/70 (37%)
DUF4749 653..>699 CDD:464948
Pdlim5XP_006233474.1 PDZ_PDLIM-like 5..83 CDD:467235 26/75 (35%)
PLN00049 <36..>142 CDD:177681 31/115 (27%)
PHA03378 <181..447 CDD:223065 60/327 (18%)
DUF4749 214..316 CDD:464948 32/166 (19%)
LIM1_ENH 448..499 CDD:188837
LIM 507..558 CDD:413332
LIM 566..620 CDD:413332
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.