DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp67 and lims2

DIOPT Version :10

Sequence 1:NP_648358.2 Gene:Zasp67 / 39148 FlyBaseID:FBgn0036044 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_001018506.2 Gene:lims2 / 553696 ZFINID:ZDB-GENE-050522-56 Length:377 Species:Danio rerio


Alignment Length:70 Identity:20/70 - (28%)
Similarity:28/70 - (40%) Gaps:17/70 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   570 AKDKKKDLDQEQKQQQQQQQEPLSEEQNFKKQKRHD--VIEELEEHLVRKNNP--------RRSK 624
            |:.:..:||.:..||.|...||       :..||.|  |.:|..:..||.|..        .|.|
Zfish     3 AEAEAPELDVDGLQQNQTAGEP-------EVPKRSDVKVYKEFCDFYVRYNMTNALANAVCERCK 60

  Fly   625 RAFGP 629
            .:|.|
Zfish    61 SSFSP 65

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp67NP_648358.2 PDZ_ZASP52-like 4..84 CDD:467281
DUF4749 653..>699 CDD:464948
lims2NP_001018506.2 LIM1_PINCH 56..114 CDD:188717 4/10 (40%)
LIM2_PINCH 117..168 CDD:188718
LIM3_PINCH 181..230 CDD:188719
LIM4_PINCH 236..289 CDD:188720
LIM5_PINCH 297..350 CDD:188721
Blue background indicates that the domain is not in the aligned region.

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