DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp67 and pdlim1

DIOPT Version :10

Sequence 1:NP_648358.2 Gene:Zasp67 / 39148 FlyBaseID:FBgn0036044 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_001017870.1 Gene:pdlim1 / 550568 ZFINID:ZDB-GENE-030131-5227 Length:322 Species:Danio rerio


Alignment Length:199 Identity:55/199 - (27%)
Similarity:82/199 - (41%) Gaps:48/199 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PWGFRLVGGADYDYPLTVVKVTEGSIADEAGLRVEDIIVRINDTAATPLTHDEAHRLIMGSGSVF 78
            |||||||||.|::.|||:.:||.||.|.:|.|.:.|:|:.|:..:...:||.||...|...|...
Zfish    12 PWGFRLVGGKDFEQPLTISRVTPGSKAAQADLCMGDMILAIDGESTDGMTHLEAQNKIKACGDEM 76

  Fly    79 YFGVYR------------ENEEDAYEC-LKKFPTSE----GSL-TKSPMPTISPSPTPSLS---- 121
            ...:.|            :.:.:.|:. |.|..|.|    ||. .:|.||..|.||....:    
Zfish    77 ALSIDRSESKMWSPLVTEDGKTNPYKMNLAKTNTQEEKHIGSAHNRSAMPFNSASPRVVTNQYNN 141

  Fly   122 --------------------QLTETTNARTPEPEPFVPLPRELAAATMAAPAVEVDVDVLAECRQ 166
                                |.|.|::..:...:|..|      ..|.||.|.:.:|..:.:..|
Zfish   142 PAGLYSSENIKNFNSAVDEVQTTATSSEASRNSDPSKP------GHTKAAIAADSEVYKMLQENQ 200

  Fly   167 PMSE 170
            ..:|
Zfish   201 ESNE 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp67NP_648358.2 PDZ_ZASP52-like 4..84 CDD:467281 29/69 (42%)
DUF4749 653..>699 CDD:464948
pdlim1NP_001017870.1 PDZ_PDLIM-like 4..82 CDD:467235 29/69 (42%)
DUF4749 133..229 CDD:464948 12/78 (15%)
LIM_CLP36 253..304 CDD:188832
Blue background indicates that the domain is not in the aligned region.

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