DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zasp67 and Lims1

DIOPT Version :9

Sequence 1:NP_648358.2 Gene:Zasp67 / 39148 FlyBaseID:FBgn0036044 Length:730 Species:Drosophila melanogaster
Sequence 2:XP_017457250.1 Gene:Lims1 / 499443 RGDID:1560732 Length:407 Species:Rattus norvegicus


Alignment Length:91 Identity:24/91 - (26%)
Similarity:35/91 - (38%) Gaps:26/91 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 VC------MSSDVLRSLNE---------EVTKTKLE-KDKENRQWSTFLQRPNRPVPK---SKQS 300
            ||      :..||:.:||:         ....|||. |||       |:....:||.|   .|..
  Rat   322 VCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKDK-------FVAIDLKPVCKYCYEKMP 379

  Fly   301 LEAERRAANAYKVTIVKSAPREKSPM 326
            .|.:||.|...:....|...|::.|:
  Rat   380 EELKRRLARREREARDKEKQRKRKPV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp67NP_648358.2 PDZ_signaling 2..75 CDD:238492
DUF4749 653..>699 CDD:292558
Lims1XP_017457250.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348850
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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