DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp67 and Ush1c

DIOPT Version :9

Sequence 1:NP_648358.2 Gene:Zasp67 / 39148 FlyBaseID:FBgn0036044 Length:730 Species:Drosophila melanogaster
Sequence 2:XP_006229284.1 Gene:Ush1c / 308596 RGDID:1303329 Length:910 Species:Rattus norvegicus


Alignment Length:610 Identity:124/610 - (20%)
Similarity:200/610 - (32%) Gaps:208/610 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKMCRFDNV-PWGFRLV--GGADYDYPLTVVKVTEGSIADEAGLRVEDIIVRINDTAATPLTHDE 66
            :|..|.|.: |.|..|.  ||.::...|.:..:.:|..||..||:|.|.|||||..:.:..||:|
  Rat    85 LKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEE 149

  Fly    67 AHRLIMG----SGSVFYFGV--YRENEED--AYECLKKFPTSEGSLTKSPMPTISPSPTPSLSQL 123
            ...||..    |..|.:.|:  .:.:.|:  .::.:.:|.:..|.:.               ..|
  Rat   150 VINLIRTKKTVSIKVRHIGLIPVKSSPEEPLKWQYVDQFVSESGGVR---------------GGL 199

  Fly   124 TETTNARTPEPEPFVPL--PRELAAATMAAPAVEVDVDVLAECRQPMS-EVHSEEKRGD----VN 181
            :...|..|.|.:.|:.|  .|.|..:..:.|..:..:.|.......:| ||..|  .||    ||
  Rat   200 SSPGNRTTKEKKVFISLVGSRGLGCSISSGPIQKPGIFVSNVKPGSLSAEVGLE--TGDQIVEVN 262

  Fly   182 GHDAPGQADEGGLPV----------------ENLYLPD---LPDRPCSALSERQEIKLVEEEIA- 226
            |.|......:..:.|                ..|::.|   |.:.....| :|||: |:::.:| 
  Rat   263 GIDFTNLDHKEAVNVLKSSRSLTISIVAGAGRELFMTDRERLEEARQHEL-QRQEL-LMQKRLAM 325

  Fly   227 ---AVLSGESEVLKEHNVLGVNFYRIFPKPGVCMSSDVLRSLNEEVTKTKLEKDKENRQWS---- 284
               .:|..:.|:.::..           |.....:::......:|:.:...|::|..:||.    
  Rat   326 ESNKILQEQQEMERQRR-----------KEIAQKAAEENERYRKEMEQISEEEEKFKKQWEEDWG 379

  Fly   285 --------TFLQRPNRPVP---------------------------------------KSKQSLE 302
                    ..:.....|||                                       |:|:.||
  Rat   380 SKEQLILPKTITAEVHPVPLRKPKSFGWFYRYDGKFPTIRKKAKEKKKAKYDSLQDLRKNKKELE 444

  Fly   303 AERRAANAYKVTIVKSAPREKSPMPEAKPAPKEATPPKEVEKKEEEPVPE--------------- 352
            .|::   .||         ||..|.|.:...|.....:||.:.|.|.:.|               
  Rat   445 FEQK---LYK---------EKEEMLEKEKQLKINRLAQEVSETEREDLEESEKTQYWVERLCQTR 497

  Fly   353 ------------EVVEPEPEPEKDEEPLPTDSEVPNLEQ------LPETELPD------------ 387
                        |:....|.|.....||     ||.|.:      |..|:|.|            
  Rat   498 LQQISSAENEITEMTTGPPPPPPSVSPL-----VPPLRRFAGGIHLHTTDLDDIPLDMFYYPPKT 557

  Fly   388 -------EQPEKSDAPKEVCEPEVVIQTEPGSPDGNEASDGPAGATPPAEPITPVPVKSEEELAL 445
                   ..|..|:.|.:|..|.|:    |.|...:.:|......|||..||.|.|....::|..
  Rat   558 PSALPVMPHPPPSNPPSKVPAPPVL----PSSDHMSSSSSPWVQHTPPPIPIPPPPSIPTQDLTP 618

  Fly   446 ERQLADVQRQLAALSSLPSTIQSTL 470
            .|             .|||.::..|
  Rat   619 TR-------------PLPSALEEVL 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp67NP_648358.2 PDZ_signaling 2..75 CDD:238492 26/76 (34%)
DUF4749 653..>699 CDD:292558
Ush1cXP_006229284.1 harmonin_N 2..80 CDD:259819
PDZ_signaling 85..165 CDD:238492 27/79 (34%)
PDZ_signaling 209..289 CDD:238492 18/81 (22%)
Cgr1 <316..>358 CDD:281823 6/53 (11%)
PDZ_signaling 751..838 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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