DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp67 and Pdlim3

DIOPT Version :10

Sequence 1:NP_648358.2 Gene:Zasp67 / 39148 FlyBaseID:FBgn0036044 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_446102.2 Gene:Pdlim3 / 114108 RGDID:620427 Length:364 Species:Rattus norvegicus


Alignment Length:285 Identity:65/285 - (22%)
Similarity:108/285 - (37%) Gaps:65/285 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PWGFRLVGGADYDYPLTVVKVTEGSIADEAGLRVEDIIVRINDTAATPLTHDEAHRLIM------ 72
            ||||||.||.|::.||.:.::|.||.|:.|.|...|:|:.|:......:||.:|...|.      
  Rat    12 PWGFRLSGGIDFNQPLVITRITPGSKAEAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQL 76

  Fly    73 -------------------GSGSVFYFGVYRENEEDAYECLKKFPTSEGSLTKSPMPTISPSPTP 118
                               |....|...:..|.::..|        .|......|.|.|.|..|.
  Rat    77 CLKIDRAETRLWSPQVSEDGKAHPFKINLEAEPQDVNY--------FEHKHNIRPKPFIIPGRTS 133

  Fly   119 SLSQ---LTETTNARTPEPEPFVP--LPRELAAATMAAPAVEVDVD------VLAECRQPMSEVH 172
            ..|.   :...:...||.....|.  .|.:|..|...||.:.::::      |.|:...|| :::
  Rat   134 GCSTPSGIDCGSGRSTPSSVSTVSTICPGDLKVAAKMAPNIPLEMELPGVKIVHAQFNTPM-QLY 197

  Fly   173 SEEK-----RGDVNG--HDAPGQADEGGL--PVENLY--LPDLPDRPCSALSERQEIKLVEEEI- 225
            |::.     :|.|:.  .:.|..::....  |..::|  |.|..|.| :|..:....::::|.: 
  Rat   198 SDDNIMETLQGQVSTALGETPSMSEPTASVPPQSDVYRMLHDNRDEP-AAPRQSGSFRVLQELVN 261

  Fly   226 -------AAVLSGESEVLKEHNVLG 243
                   |...|..:.|.|.|...|
  Rat   262 DGSDDRPAGTRSVRAPVTKVHGGAG 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp67NP_648358.2 PDZ_ZASP52-like 4..84 CDD:467281 26/94 (28%)
DUF4749 653..>699 CDD:464948
Pdlim3NP_446102.2 PDZ_PDLIM-like 4..82 CDD:467235 24/69 (35%)
DUF4749 184..272 CDD:464948 17/89 (19%)
LIM_ALP 294..346 CDD:188834
Blue background indicates that the domain is not in the aligned region.

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