DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ae2 and BOR4

DIOPT Version :9

Sequence 1:NP_648357.1 Gene:Ae2 / 39147 FlyBaseID:FBgn0036043 Length:1268 Species:Drosophila melanogaster
Sequence 2:NP_001319010.1 Gene:BOR4 / 838116 AraportID:AT1G15460 Length:683 Species:Arabidopsis thaliana


Alignment Length:661 Identity:158/661 - (23%)
Similarity:262/661 - (39%) Gaps:162/661 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   698 LEKTGRLWGGLRNDLKRRMPMYKSDILDGLNT--ETLAATIFMYFACLSTAITFGGLVSAKTNSW 760
            ::.:.||:.|:..||:.|...||.|.:.||.:  ..||.|.:::||.....|.||..:|..|...
plant     6 VDSSKRLFRGIVADLRGRALCYKEDWVAGLRSGFGILAPTTYIFFASALPVIAFGEQLSRDTEGA 70

  Fly   761 IGISETLISCSLVGIVFHCLSCQPLVIIGTTGPLLLFDEALMVFCT-QHEFD---FLSLRVYVGV 821
            :...|||.|.:|.|::...|..|||:|:|...|.:|....|..|.. :.|..   :|:...:|.|
plant    71 LSTVETLASTALCGVIHSILGGQPLLILGVAEPTVLMYVYLYNFAIGRPELGKQLYLAWAAWVCV 135

  Fly   822 WLIIIALTVSAFEGSVYVRLLTRFTQEIFSALITLIYIVETFMKLISIYRENPLLSDYNLPPPTL 886
            |..::...::....:..:...||...|:|..||::::|.:....::         |::.:|....
plant   136 WTALLLFVMAILNTADIINRFTRVAGELFGMLISVLFIQQAIKGMV---------SEFGMPKDED 191

  Fly   887 VAHEHATNESLLNATASVTTNITQMVMNISTTAMPIGPPPLPKNQPNTALFCTILTLATFVVAYY 951
            ...|....|.|.       ||                           .|...|.|......|..
plant   192 SKLEKYKFEWLY-------TN---------------------------GLLGLIFTFGLLYTALK 222

  Fly   952 LKLFRNSHFLGRNARRALGDFGVPISIAIFVLVDYLVPAVYTEKLVVPEGL-----SP---SDPS 1008
            .:..|:..:.....|..:.|:|||:.:.::..:.:..|:    ||  |.|:     ||   ..||
plant   223 SRKARSWRYGTGWYRSFIADYGVPLMVVVWTALSFSTPS----KL--PSGVPRRLFSPLPWDSPS 281

  Fly  1009 KRGWYIGFD---TSSTWIPFACVIPALLVYILIFMESQISELIVDKPDRGLKKGSGLHWDIVLLC 1070
            ...|.:..|   .|..:| ||..||||::..|.|.:..::..:..:.:..|||.|..|:||:||.
plant   282 LSHWTVIKDMGKVSPGYI-FAAFIPALMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLG 345

  Fly  1071 LLNCACGIFGMPWHCAATVRSVTHVSSVTIMSR-------------------------------- 1103
            .:...||:.|:|.......:|..|..|:.::.|                                
plant   346 FMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKTAKESIRKRETSSQVYENMQEVF 410

  Fly  1104 ---------------------------------------------THAPGESPRIVDVKEQRLSG 1123
                                                         .|.....|  |.|.|||:|.
plant   411 IEMDKSPLAQTDPSVIIELQDLKEAVMKSNDEEREGDEESGFDPEKHLDAYLP--VRVNEQRVSN 473

  Fly  1124 FFVCLMIGLSVLMAPLLRLIPMAVLFGVFLYMGVASMSGVQLFERIRLYFMP------VKHYPPT 1182
            ....|::..:||..|.::|||.::|:|.|.||.:.|:.|.|.|||:.|.|:|      |......
plant   474 LLQSLLVAGAVLAMPAIKLIPTSILWGYFAYMAIDSLPGNQFFERLTLLFVPTSRRFKVLEGAHA 538

  Fly  1183 SYVKRLRPWK-LHLFTTIQV----LCLVLLWSVKSSQFSLAFPFFLIMMVPIRQN-LTKLYKPEE 1241
            |:|::: |:| :..||.:|:    ||..:.| :..:......||||  ::.|||. |.||:.|..
plant   539 SFVEKV-PYKSMAAFTLLQIFYFGLCYGVTW-IPVAGIMFPVPFFL--LIAIRQYILPKLFNPAH 599

  Fly  1242 MQALDGSEMKK 1252
            ::.||.:|.::
plant   600 LRELDAAEYEE 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ae2NP_648357.1 ae 260..1267 CDD:273290 158/661 (24%)
Band_3_cyto 287..618 CDD:284893
HCO3_cotransp 698..1199 CDD:279322 140/601 (23%)
BOR4NP_001319010.1 Xan_ur_permease 9..555 CDD:390063 140/598 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1172
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265068at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1016
orthoMCL 1 0.900 - - OOG6_100185
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X102
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.720

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