DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and LGR5

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_003658.1 Gene:LGR5 / 8549 HGNCID:4504 Length:907 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
LGR5NP_003658.1 LRRNT 33..70 CDD:214470
leucine-rich repeat 68..91 CDD:275380
PLN00113 71..>426 CDD:215061
leucine-rich repeat 92..115 CDD:275380
leucine-rich repeat 116..139 CDD:275380
leucine-rich repeat 140..163 CDD:275380
leucine-rich repeat 164..187 CDD:275380
leucine-rich repeat 188..211 CDD:275380
leucine-rich repeat 212..235 CDD:275380
leucine-rich repeat 236..258 CDD:275380
leucine-rich repeat 259..282 CDD:275380
leucine-rich repeat 283..304 CDD:275380
leucine-rich repeat 307..353 CDD:275378
leucine-rich repeat 354..375 CDD:275378
leucine-rich repeat 376..389 CDD:275378
leucine-rich repeat 400..423 CDD:275378
leucine-rich repeat 445..459 CDD:275378
7tmA_LGR5 558..831 CDD:320485
TM helix 1 559..585 CDD:320485
TM helix 2 592..617 CDD:320485
TM helix 3 637..667 CDD:320485
TM helix 4 679..701 CDD:320485
TM helix 5 721..750 CDD:320485
TM helix 6 759..789 CDD:320485
TM helix 7 799..824 CDD:320485
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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