DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6749 and PXY

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_200956.1 Gene:PXY / 836269 AraportID:AT5G61480 Length:1041 Species:Arabidopsis thaliana


Alignment Length:494 Identity:112/494 - (22%)
Similarity:174/494 - (35%) Gaps:125/494 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 SGENADHL-ANLLDLD-----LTGAAPINVHTNGFSILPNLRQLNLSGCGLVDIRGNHFAPESAL 130
            ||...|:: |.::.||     |:|..||.:.     .|.:|..|||||..|...........:.|
plant    72 SGVVCDNVTAQVISLDLSHRNLSGRIPIQIR-----YLSSLLYLNLSGNSLEGSFPTSIFDLTKL 131

  Fly   131 QRIDFSHNQMELLDRDFFGNLRKL----IYANFSHN--ALKQCDLPHMPLLNRLELGHNRL---V 186
            ..:|.|.|.   .|..|...:.||    ::..||:|  .|...|:..:..|..|..|.:..   :
plant   132 TTLDISRNS---FDSSFPPGISKLKFLKVFNAFSNNFEGLLPSDVSRLRFLEELNFGGSYFEGEI 193

  Fly   187 NATFGVCPQLQEL----------------ILNDNQLIQLDVNAFRG--------LHGLLELQLSG 227
            .|.:|...:|:.:                :|.:.|.:::..|.|.|        |..|....:|.
plant   194 PAAYGGLQRLKFIHLAGNVLGGKLPPRLGLLTELQHMEIGYNHFNGNIPSEFALLSNLKYFDVSN 258

  Fly   228 NRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRV 292
            ..||....:....|:.|..|.|.||......|..:..:::    |:.||.|.|::.....:.|..
plant   259 CSLSGSLPQELGNLSNLETLFLFQNGFTGEIPESYSNLKS----LKLLDFSSNQLSGSIPSGFST 319

  Fly   293 LARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSYNNLE-- 355
            |..|..|.:..|:::...|.....|..|..|:|..|....:.|....:...|:|:|:|.|:..  
plant   320 LKNLTWLSLISNNLSGEVPEGIGELPELTTLFLWNNNFTGVLPHKLGSNGKLETMDVSNNSFTGT 384

  Fly   356 --------------FLEEQIFGGNTLPR-------MRRLNLNGNRMKHLHPLAFSSLPFLEYLKL 399
                          .|...:|.|. ||:       :.|.....||:....|:.|.||..|.::.|
plant   385 IPSSLCHGNKLYKLILFSNMFEGE-LPKSLTRCESLWRFRSQNNRLNGTIPIGFGSLRNLTFVDL 448

  Fly   400 GHNELKSLDVRMFAPMRRLQKLHLGHN-----LLEEI----NLDVLESLSSVQEILVDNNRLTFL 455
            .:|.........||....||.|:|..|     |.|.|    ||.:.                   
plant   449 SNNRFTDQIPADFATAPVLQYLNLSTNFFHRKLPENIWKAPNLQIF------------------- 494

  Fly   456 AKVNVSFPNL-------------KRVAIEGN------PW 475
               :.||.||             .|:.::||      ||
plant   495 ---SASFSNLIGEIPNYVGCKSFYRIELQGNSLNGTIPW 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 43/185 (23%)
LRR_8 104..164 CDD:290566 18/65 (28%)
leucine-rich repeat 106..129 CDD:275380 7/22 (32%)
leucine-rich repeat 130..153 CDD:275380 6/22 (27%)
leucine-rich repeat 154..195 CDD:275380 11/49 (22%)
LRR_RI 194..455 CDD:238064 67/316 (21%)
LRR_8 194..254 CDD:290566 17/83 (20%)
leucine-rich repeat 196..219 CDD:275380 7/46 (15%)
leucine-rich repeat 220..243 CDD:275380 5/22 (23%)
leucine-rich repeat 244..267 CDD:275380 6/22 (27%)
LRR_8 271..330 CDD:290566 16/58 (28%)
leucine-rich repeat 272..295 CDD:275380 7/22 (32%)
leucine-rich repeat 296..319 CDD:275380 5/22 (23%)
LRR_8 319..380 CDD:290566 17/83 (20%)
leucine-rich repeat 320..343 CDD:275380 5/22 (23%)
leucine-rich repeat 344..369 CDD:275380 9/40 (23%)
LRR_8 368..428 CDD:290566 18/71 (25%)
leucine-rich repeat 370..393 CDD:275380 7/22 (32%)
leucine-rich repeat 394..417 CDD:275380 5/22 (23%)
leucine-rich repeat 418..441 CDD:275380 10/31 (32%)
PXYNP_200956.1 PLN00113 61..1000 CDD:215061 112/494 (23%)
leucine-rich repeat 85..106 CDD:275380 7/25 (28%)
leucine-rich repeat 107..130 CDD:275380 7/22 (32%)
leucine-rich repeat 131..162 CDD:275380 8/33 (24%)
leucine-rich repeat 155..178 CDD:275378 5/22 (23%)
leucine-rich repeat 203..226 CDD:275380 2/22 (9%)
leucine-rich repeat 227..250 CDD:275380 5/22 (23%)
leucine-rich repeat 251..274 CDD:275380 5/22 (23%)
leucine-rich repeat 275..298 CDD:275380 6/22 (27%)
leucine-rich repeat 299..322 CDD:275380 7/22 (32%)
leucine-rich repeat 323..346 CDD:275380 5/22 (23%)
leucine-rich repeat 347..370 CDD:275380 5/22 (23%)
leucine-rich repeat 371..394 CDD:275380 5/22 (23%)
leucine-rich repeat 395..418 CDD:275380 5/23 (22%)
leucine-rich repeat 419..442 CDD:275380 7/22 (32%)
leucine-rich repeat 443..462 CDD:275380 3/18 (17%)
leucine-rich repeat 467..537 CDD:275380 19/86 (22%)
leucine-rich repeat 491..513 CDD:275378 5/43 (12%)
leucine-rich repeat 538..561 CDD:275380
leucine-rich repeat 562..582 CDD:275380
leucine-rich repeat 586..608 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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