DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6749 and GSO2

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_199283.1 Gene:GSO2 / 834499 AraportID:AT5G44700 Length:1252 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
GSO2NP_199283.1 LRRNT_2 28..68 CDD:285463
leucine-rich repeat 76..96 CDD:275380
LRR_RI 135..406 CDD:238064
LRR_8 145..204 CDD:290566
leucine-rich repeat 146..169 CDD:275380
leucine-rich repeat 170..193 CDD:275380
leucine-rich repeat 194..241 CDD:275380
LRR_8 240..300 CDD:290566
leucine-rich repeat 242..265 CDD:275380
leucine-rich repeat 266..289 CDD:275380
PLN00113 285..1232 CDD:215061
leucine-rich repeat 290..313 CDD:275380
leucine-rich repeat 314..338 CDD:275380
leucine-rich repeat 339..362 CDD:275380
leucine-rich repeat 363..386 CDD:275380
leucine-rich repeat 387..410 CDD:275380
leucine-rich repeat 411..434 CDD:275380
leucine-rich repeat 435..458 CDD:275380
leucine-rich repeat 459..482 CDD:275380
leucine-rich repeat 483..506 CDD:275380
leucine-rich repeat 507..528 CDD:275380
leucine-rich repeat 531..554 CDD:275380
leucine-rich repeat 555..571 CDD:275380
LRR_RI 603..843 CDD:238064
leucine-rich repeat 604..625 CDD:275380
leucine-rich repeat 626..649 CDD:275380
leucine-rich repeat 650..673 CDD:275380
leucine-rich repeat 674..697 CDD:275380
leucine-rich repeat 698..721 CDD:275380
leucine-rich repeat 722..745 CDD:275380
leucine-rich repeat 746..769 CDD:275380
leucine-rich repeat 770..794 CDD:275380
leucine-rich repeat 795..818 CDD:275380
leucine-rich repeat 819..839 CDD:275380
STKc_IRAK 954..1232 CDD:270968
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.