DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and Lrrn3

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_110483.2 Gene:Lrrn3 / 81514 RGDID:71066 Length:707 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
Lrrn3NP_110483.2 LRRNT 28..72 CDD:214470
LRR 1 70..91
LRR <72..355 CDD:227223
leucine-rich repeat 72..93 CDD:275380
LRR 2 93..114
leucine-rich repeat 94..117 CDD:275380
LRR 3 117..138
leucine-rich repeat 118..141 CDD:275380
LRR 4 141..162
leucine-rich repeat 142..165 CDD:275380
LRR 5 165..186
leucine-rich repeat 166..189 CDD:275380
LRR 6 189..210
leucine-rich repeat 190..213 CDD:275380
LRR 7 213..234
leucine-rich repeat 214..237 CDD:275380
LRR 8 237..258
leucine-rich repeat 238..261 CDD:275380
LRR 9 261..282
leucine-rich repeat 262..285 CDD:275380
LRR 10 285..304
leucine-rich repeat 286..310 CDD:275380
LRR 11 310..332
leucine-rich repeat 311..333 CDD:275380
LRR 12 335..358
leucine-rich repeat 336..359 CDD:275378
PCC 341..>405 CDD:188093
leucine-rich repeat 360..372 CDD:275378
Ig 440..513 CDD:416386
Ig strand B 440..447 CDD:409353
Ig strand C 453..458 CDD:409353
Ig strand C' 461..464 CDD:409353
Ig strand D 470..474 CDD:409353
Ig strand E 479..483 CDD:409353
Ig strand F 493..500 CDD:409353
Ig strand G 503..513 CDD:409353
fn3 526..593 CDD:394996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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