DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6749 and Tril

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_080093.1 Gene:Tril / 66873 MGIID:1914123 Length:809 Species:Mus musculus


Alignment Length:398 Identity:122/398 - (30%)
Similarity:180/398 - (45%) Gaps:53/398 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 LNLSGCGLVDIRGNHFAPESALQRIDFSHNQMELLDRDFFGNLRK----------LIYA---NFS 160
            |.:.||.....|.....||    |.|..|.|..|........:.|          |.|:   ||.
Mouse    11 LVVCGCLAFPPRAESVCPE----RCDCQHPQHLLCTNRGLRAVPKTSSLPSPQDVLTYSLGGNFI 71

  Fly   161 HNALKQCDLPHMPLLNRLELGHNRLVN---ATFGVCPQLQELILNDNQLIQLDVNAFRGLHGLLE 222
            .| :...|...:..|.||:|.:|::.:   .||....:|:||.|.:|.|..|.......|..|..
Mouse    72 TN-ITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRI 135

  Fly   223 LQLSGNRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFV-LHLQQLDLSGNRIRLLF 286
            |..:||.:..:...:|:.|..|.||.|..|.|.||...||..:.|.: |||:     .||||.|.
Mouse   136 LYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLE-----SNRIRFLG 195

  Fly   287 DNQFRVLARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSY 351
            .|.|..|.:|:.|::|.|   .|.|       |||            ..|||..|.:|.||.||.
Mouse   196 KNAFSQLGKLRFLNLSAN---ELQP-------SLR------------HAATFVPLRSLSTLILSA 238

  Fly   352 NNLEFLEEQIFGGNTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLGHNELKSLDVRMFAPMR 416
            |:|:.|..::|  ..|||:..|:|:||::.||.|.||..|..|..|:|..|.|..|.:.:..|:.
Mouse   239 NSLQHLGPRVF--QHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLH 301

  Fly   417 RLQKLHLGHNLLEEINLDVLESLSSVQEILVDNNRLTFLA-KVNVSFPNLKRVAIEGNPWQCPCF 480
            .|:.|.|..|.|..::.........::|:.:.:|.|:.|: .:..:.|.|.|:.::||.|.|.|.
Mouse   302 SLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASPALYRLDLDGNGWTCDCR 366

  Fly   481 VK-LQHWL 487
            :: |:.|:
Mouse   367 LRGLKRWM 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 45/162 (28%)
LRR_8 104..164 CDD:290566 17/67 (25%)
leucine-rich repeat 106..129 CDD:275380 6/19 (32%)
leucine-rich repeat 130..153 CDD:275380 5/22 (23%)
leucine-rich repeat 154..195 CDD:275380 13/46 (28%)
LRR_RI 194..455 CDD:238064 86/261 (33%)
LRR_8 194..254 CDD:290566 19/59 (32%)
leucine-rich repeat 196..219 CDD:275380 8/22 (36%)
leucine-rich repeat 220..243 CDD:275380 6/22 (27%)
leucine-rich repeat 244..267 CDD:275380 10/22 (45%)
LRR_8 271..330 CDD:290566 19/58 (33%)
leucine-rich repeat 272..295 CDD:275380 9/22 (41%)
leucine-rich repeat 296..319 CDD:275380 6/22 (27%)
LRR_8 319..380 CDD:290566 23/60 (38%)
leucine-rich repeat 320..343 CDD:275380 6/22 (27%)
leucine-rich repeat 344..369 CDD:275380 10/24 (42%)
LRR_8 368..428 CDD:290566 23/59 (39%)
leucine-rich repeat 370..393 CDD:275380 10/22 (45%)
leucine-rich repeat 394..417 CDD:275380 7/22 (32%)
leucine-rich repeat 418..441 CDD:275380 5/22 (23%)
TrilNP_080093.1 LRR_RI <11..194 CDD:238064 57/192 (30%)
leucine-rich repeat 37..57 CDD:275378 3/19 (16%)
LRR 1 61..81 6/20 (30%)
LRR_8 84..143 CDD:290566 19/58 (33%)
LRR 2 84..105 7/20 (35%)
leucine-rich repeat 85..108 CDD:275380 7/22 (32%)
LRR 3 108..129 7/20 (35%)
leucine-rich repeat 109..132 CDD:275380 8/22 (36%)
LRR 4 132..153 5/20 (25%)
leucine-rich repeat 133..156 CDD:275380 6/22 (27%)
LRR_8 156..215 CDD:290566 26/66 (39%)
LRR 5 156..177 10/20 (50%)
leucine-rich repeat 157..180 CDD:275380 10/22 (45%)
LRR 6 180..201 11/25 (44%)
leucine-rich repeat 181..204 CDD:275380 11/27 (41%)
LRR 7 204..223 9/40 (23%)
leucine-rich repeat 205..230 CDD:275380 13/46 (28%)
LRR_RI 229..>364 CDD:238064 44/136 (32%)
LRR_8 229..289 CDD:290566 26/61 (43%)
LRR 8 230..251 9/22 (41%)
leucine-rich repeat 231..254 CDD:275380 10/24 (42%)
LRR 9 254..275 10/20 (50%)
leucine-rich repeat 255..278 CDD:275380 10/22 (45%)
LRR 10 278..298 6/19 (32%)
leucine-rich repeat 279..302 CDD:275380 7/22 (32%)
LRR_8 302..359 CDD:290566 12/56 (21%)
LRR 11 302..323 5/20 (25%)
leucine-rich repeat 303..323 CDD:275380 5/19 (26%)
LRR 12 326..347 4/20 (20%)
leucine-rich repeat 327..350 CDD:275380 4/22 (18%)
TPKR_C2 359..406 CDD:301599 6/16 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..462
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..563
FN3 587..659 CDD:214495
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R11342
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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