DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and Lrrc4

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001032413.1 Gene:Lrrc4 / 641521 RGDID:1560026 Length:652 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
Lrrc4NP_001032413.1 LRRNT 45..78 CDD:214470
LRR_8 74..132 CDD:404697
LRR 1 75..96
leucine-rich repeat 76..99 CDD:275380
PPP1R42 96..300 CDD:411060
LRR 2 99..120
leucine-rich repeat 100..123 CDD:275380
LRR 3 123..144
leucine-rich repeat 124..147 CDD:275380
LRR 4 147..168
leucine-rich repeat 148..171 CDD:275380
LRR 5 171..193
leucine-rich repeat 172..196 CDD:275380
LRR 6 196..217
leucine-rich repeat 197..218 CDD:275380
LRR 7 218..239
leucine-rich repeat 219..242 CDD:275380
LRR 8 242..263
leucine-rich repeat 243..266 CDD:275380
LRR 9 266..287
leucine-rich repeat 267..288 CDD:275380
LRRCT 299..350 CDD:214507
IG_like 358..440 CDD:214653
Ig strand B 369..373 CDD:409353
Ig strand C 380..384 CDD:409353
Ig strand E 406..410 CDD:409353
Ig strand F 420..425 CDD:409353
Ig strand G 433..436 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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