DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and LRCH2

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_065922.3 Gene:LRCH2 / 57631 HGNCID:29292 Length:765 Species:Homo sapiens


Alignment Length:530 Identity:109/530 - (20%)
Similarity:189/530 - (35%) Gaps:166/530 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 HTLAIRNVQTELEVGSGENADHLA--NLLDL-----DLTGAAPINVHTNGFSILPNLRQLNLSGC 114
            ||  :|::...||.........|:  .|.|.     |||.....::..|.|:.:|:...|     
Human    75 HT--VRSLDRALEEAGSSGILSLSGRKLRDFPGSGYDLTDTTQADLSRNRFTEIPSDVWL----- 132

  Fly   115 GLVDIRGNHFAPESALQRIDFSHNQMELLDRDFFGNLRKLIYANFSHNALKQC-----DLPHMPL 174
                     |||   |:.::..||.::.:. :...||:.|.|.|.|.|.|...     |||    
Human   133 ---------FAP---LETLNLYHNCIKTIP-EAIKNLQMLTYLNISRNLLSTLPKYLFDLP---- 180

  Fly   175 LNRLELGHNRLVNATFGVCPQLQELILNDNQLIQLDVNAFRGLHGLLELQLSGNRLSSIGLETFQ 239
                                 |:.|::::|:|:.:.....: |..|:||.:|.|.:..:. :...
Human   181 ---------------------LKVLVVSNNKLVSIPEEIGK-LKDLMELDISCNEIQVLP-QQMG 222

  Fly   240 PLAQLRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRVLARLQMLDVSRN 304
            .|..||:||:.:|.|..| |:..|.     |.|.:||.|.|::..: ...:|.|..||::.:..|
Human   223 KLHSLRELNIRRNNLHVL-PDELGD-----LPLVKLDFSCNKVTEI-PVCYRKLHHLQVIILDNN 280

  Fly   305 SIASLSPAHFVGLGSL---RKLYLQYNAILEIKPATFAALLNLDTLDL--------SYNNLEFLE 358
            .: .:.||.....|.:   :.|.:|....::.||         |:|||        |....:.:|
Human   281 PL-QVPPAQICLKGKVHIFKYLNIQACCRMDKKP---------DSLDLPSLSKRMPSQPLTDSME 335

  Fly   359 EQIFGGNTLPRMRRLNLNG-NRMKHLHPLAFSSLPFLEYLKLGHNELKSLDVRMFAPMRRLQKLH 422
            :.....|..|.....:.|| .|:....|              ..::..||               
Human   336 DFYPNKNHGPDSGIGSDNGEKRLSTTEP--------------SDDDTVSL--------------- 371

  Fly   423 LGHNLLEEINLD--------VLESLSSVQEILVDNNRLTFLAKVNVSFPNLKRVAI--EGNPWQC 477
              |:.:.|.|.:        ::.|.:..|:   |.....|:.      ||.:.||:  :||    
Human   372 --HSQVSESNREQTSRNDSHIIGSKTDSQK---DQEVYDFVD------PNTEDVAVPEQGN---- 421

  Fly   478 PCFVKLQHWLATRDVVYLRDNTGYYKGERPLCIVTNVDYCIQNLQAVRRLGILGDFQGEQVEADA 542
                           .::.....::||:         :.|.:..:....||.....:.||:.|:.
Human   422 ---------------AHIGSFVSFFKGK---------EKCSEKSRKNEELGDEKRLEKEQLLAEE 462

  Fly   543 FDDDASAAQD 552
            .|||.....|
Human   463 EDDDLKEVTD 472

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 36/157 (23%)
LRR_8 104..164 CDD:290566 15/59 (25%)
leucine-rich repeat 106..129 CDD:275380 4/22 (18%)
leucine-rich repeat 130..153 CDD:275380 5/22 (23%)
leucine-rich repeat 154..195 CDD:275380 9/45 (20%)
LRR_RI 194..455 CDD:238064 58/280 (21%)
LRR_8 194..254 CDD:290566 16/59 (27%)
leucine-rich repeat 196..219 CDD:275380 5/22 (23%)
leucine-rich repeat 220..243 CDD:275380 6/22 (27%)
leucine-rich repeat 244..267 CDD:275380 9/22 (41%)
LRR_8 271..330 CDD:290566 15/61 (25%)
leucine-rich repeat 272..295 CDD:275380 7/22 (32%)
leucine-rich repeat 296..319 CDD:275380 5/22 (23%)
LRR_8 319..380 CDD:290566 14/72 (19%)
leucine-rich repeat 320..343 CDD:275380 4/25 (16%)
leucine-rich repeat 344..369 CDD:275380 7/32 (22%)
LRR_8 368..428 CDD:290566 8/60 (13%)
leucine-rich repeat 370..393 CDD:275380 4/23 (17%)
leucine-rich repeat 394..417 CDD:275380 2/22 (9%)
leucine-rich repeat 418..441 CDD:275380 4/30 (13%)
LRCH2NP_065922.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39