DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and lrrn1

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001124166.1 Gene:lrrn1 / 568527 ZFINID:ZDB-GENE-071126-1 Length:717 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
lrrn1NP_001124166.1 leucine-rich repeat 55..74 CDD:275380
LRR_RI 86..>276 CDD:238064
LRR_8 97..156 CDD:290566
leucine-rich repeat 98..121 CDD:275380
leucine-rich repeat 122..145 CDD:275380
leucine-rich repeat 146..169 CDD:275380
leucine-rich repeat 170..193 CDD:275380
leucine-rich repeat 194..217 CDD:275380
LRR_8 216..276 CDD:290566
leucine-rich repeat 218..241 CDD:275380
LRR_RI 242..401 CDD:238064
leucine-rich repeat 242..265 CDD:275380
LRR_8 264..324 CDD:290566
leucine-rich repeat 266..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
LRR_8 313..374 CDD:290566
leucine-rich repeat 315..337 CDD:275380
leucine-rich repeat 340..353 CDD:275378
leucine-rich repeat 364..376 CDD:275378
LRRCT 372..414 CDD:214507
IG_like 433..517 CDD:214653
Ig 441..517 CDD:299845
FN3 532..601 CDD:214495
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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