DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6749 and si:dkey-1j5.4

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_009293145.1 Gene:si:dkey-1j5.4 / 563949 ZFINID:ZDB-GENE-130603-91 Length:357 Species:Danio rerio


Alignment Length:349 Identity:95/349 - (27%)
Similarity:152/349 - (43%) Gaps:81/349 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 DNQLIQLDVNAFRGLHGLLELQLSGNRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQN 267
            |:.::::..|..:.|.|.|        |||:        .::..:.|.:|::.::.|..|...|.
Zfish    55 DSWILKMGENFLQDLPGSL--------LSSV--------PKIESVKLERNSIKSIHPQAFAGAQR 103

  Fly   268 FVLHLQQLDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILE 332
            .:|    |:|.||||..:....|:.|..|:.|.:.:|.||:|.|..|:|:.:|.:|.|..||:..
Zfish   104 LML----LNLQGNRISKIPVKGFKDLLNLRFLMLGQNQIANLKPNMFIGMRNLSELDLPLNALTA 164

  Fly   333 IKPATFAALLNLDTLDLSYNNLEFLEEQIFGGNTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYL 397
            :.|..|..|:.|..||||.                          ||::.:.|.||..|..|.:|
Zfish   165 LPPNAFKPLIALKVLDLSL--------------------------NRIQRISPKAFVGLEELLFL 203

  Fly   398 KLGHNELKSLDVRMFAPMRRLQKLHLGHNLLEEINLDVLESLSSVQEILVDNNRLTFL-AKVNVS 461
            .:.:|:|||:....|.|:..|:.|.|.:|||..:.:..||.||::||:.|..|.:..| |.|.:.
Zfish   204 NMDNNKLKSIQAGTFGPLTGLEMLVLDNNLLSTLTVSTLEGLSNLQELYVRKNEIESLPADVFLH 268

  Fly   462 FPNLKRVAIEG------------------------NPWQCPCFV-KLQHWLATRDVVYLRDNTGY 501
            .|.|..|.:.|                        |||:|.|.: .|.|:||       :..|.:
Zfish   269 TPKLTHVGLSGNRLHAIDGNMLANMQGLKEVFLHDNPWKCDCSINSLVHYLA-------QTKTNH 326

  Fly   502 YKGERPLCIVTNV--DYCIQNLQA 523
            ...:|..|.....  |..||.|::
Zfish   327 SPRQRLRCASPEEFRDRAIQELKS 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 10/52 (19%)
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064 72/251 (29%)
LRR_8 194..254 CDD:290566 10/50 (20%)
leucine-rich repeat 196..219 CDD:275380 3/15 (20%)
leucine-rich repeat 220..243 CDD:275380 4/22 (18%)
leucine-rich repeat 244..267 CDD:275380 4/22 (18%)
LRR_8 271..330 CDD:290566 21/58 (36%)
leucine-rich repeat 272..295 CDD:275380 8/22 (36%)
leucine-rich repeat 296..319 CDD:275380 9/22 (41%)
LRR_8 319..380 CDD:290566 14/60 (23%)
leucine-rich repeat 320..343 CDD:275380 8/22 (36%)
leucine-rich repeat 344..369 CDD:275380 5/24 (21%)
LRR_8 368..428 CDD:290566 18/59 (31%)
leucine-rich repeat 370..393 CDD:275380 6/22 (27%)
leucine-rich repeat 394..417 CDD:275380 8/22 (36%)
leucine-rich repeat 418..441 CDD:275380 9/22 (41%)
si:dkey-1j5.4XP_009293145.1 LRRNT 21..53 CDD:279764
leucine-rich repeat 36..54 CDD:275380
LRR_8 58..114 CDD:290566 17/75 (23%)
LRR_RI 59..282 CDD:238064 78/268 (29%)
leucine-rich repeat 80..103 CDD:275380 4/22 (18%)
LRR_8 103..162 CDD:290566 22/62 (35%)
leucine-rich repeat 104..127 CDD:275380 9/26 (35%)
leucine-rich repeat 128..151 CDD:275380 9/22 (41%)
LRR_8 150..210 CDD:290566 22/85 (26%)
leucine-rich repeat 152..175 CDD:275380 8/22 (36%)
leucine-rich repeat 176..199 CDD:275380 11/48 (23%)
leucine-rich repeat 200..223 CDD:275380 8/22 (36%)
LRR_8 222..282 CDD:290566 21/59 (36%)
leucine-rich repeat 224..247 CDD:275380 9/22 (41%)
leucine-rich repeat 248..271 CDD:275380 7/22 (32%)
leucine-rich repeat 272..293 CDD:275380 3/20 (15%)
LRRCT 304..356 CDD:214507 16/54 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.