DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and LOC563710

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_692159.4 Gene:LOC563710 / 563710 -ID:- Length:635 Species:Danio rerio


Alignment Length:389 Identity:104/389 - (26%)
Similarity:175/389 - (44%) Gaps:64/389 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 MPLLNRLELGHNRLVNAT--FG--VCPQLQELILNDNQLIQLDVNAFRGL-----HGLLELQLSG 227
            :|||.:..|      :||  ||  .||:....   |.:::..:.:|||.:     .|...|.|..
Zfish    12 VPLLMQAWL------SATPCFGERPCPRSCRC---DGKIVYCESSAFRDVPKNLSGGCQGLSLRY 67

  Fly   228 NRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRV 292
            |.|:|:....|..|.||..|.|..|.:..:....|..::    .|::|.||.|:|.||.:..|.:
Zfish    68 NSLASLKAGQFVGLNQLIWLYLDHNYIANVDARAFQGIR----RLKELILSSNKITLLHNTTFHL 128

  Fly   293 LARLQMLDVSRNSIASLSPAHFVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSYNNLEFL 357
            :..|:.||:|.|.:.:|.|..|.||..|..|:::.|::..:....|....||:.|||.||.|..:
Zfish   129 VPNLRNLDLSYNKLQALQPGQFQGLRKLLSLHMRSNSLKNLPSRLFQDCRNLEFLDLGYNRLRSI 193

  Fly   358 EEQIFGGNTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLGHNELKSLDVRMFAPMRRLQKLH 422
            ......|  |.::..|::..|:...::...|.....|..|.|..|.::::...:......||||.
Zfish   194 TRNSMSG--LLKLTELHIEHNQFSKINFFNFPRFYNLRALYLQWNRIRTMSEGLTWMWTSLQKLD 256

  Fly   423 LGHNLLEEINLDVLESLSSVQEILVDNNRLTFLAKVNVS------FPNLKRVAIEGNPWQC-PCF 480
            |..|.|:||:.:|..::.::|.:.:|:|:|     ||||      :.:|..:::.||.|.| |..
Zfish   257 LSGNDLQEIDAEVYRAMPNLQTLNLDSNKL-----VNVSQEAVDAWTSLTAISLAGNMWDCGPVV 316

  Fly   481 VKLQHWLATRDVVYLRDNTGYYKGERPLCIVTNVDYCIQNLQAVRRLGILGDFQGEQVEADAFD 544
            ..|..|:.|            ::|.:.:.::     |....:.          |||:| .||.|
Zfish   317 CPLVAWMRT------------FRGNKEINMI-----CASPKEV----------QGEKV-LDAVD 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 27/92 (29%)
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380 9/26 (35%)
LRR_RI 194..455 CDD:238064 73/265 (28%)
LRR_8 194..254 CDD:290566 18/64 (28%)
leucine-rich repeat 196..219 CDD:275380 4/27 (15%)
leucine-rich repeat 220..243 CDD:275380 7/22 (32%)
leucine-rich repeat 244..267 CDD:275380 5/22 (23%)
LRR_8 271..330 CDD:290566 22/58 (38%)
leucine-rich repeat 272..295 CDD:275380 9/22 (41%)
leucine-rich repeat 296..319 CDD:275380 10/22 (45%)
LRR_8 319..380 CDD:290566 16/60 (27%)
leucine-rich repeat 320..343 CDD:275380 4/22 (18%)
leucine-rich repeat 344..369 CDD:275380 9/24 (38%)
LRR_8 368..428 CDD:290566 13/59 (22%)
leucine-rich repeat 370..393 CDD:275380 3/22 (14%)
leucine-rich repeat 394..417 CDD:275380 4/22 (18%)
leucine-rich repeat 418..441 CDD:275380 10/22 (45%)
LOC563710XP_692159.4 leucine-rich repeat 60..83 CDD:275380 7/22 (32%)
LRR_RI <81..286 CDD:238064 60/210 (29%)
LRR_8 83..142 CDD:290566 20/62 (32%)
leucine-rich repeat 84..107 CDD:275380 5/26 (19%)
leucine-rich repeat 108..131 CDD:275380 9/22 (41%)
LRR_8 130..190 CDD:290566 21/59 (36%)
leucine-rich repeat 132..155 CDD:275380 10/22 (45%)
leucine-rich repeat 156..179 CDD:275380 4/22 (18%)
LRR_8 178..238 CDD:290566 17/61 (28%)
leucine-rich repeat 180..203 CDD:275380 9/24 (38%)
leucine-rich repeat 204..227 CDD:275380 3/22 (14%)
leucine-rich repeat 228..251 CDD:275380 4/22 (18%)
LRR_8 250..308 CDD:290566 19/62 (31%)
leucine-rich repeat 252..275 CDD:275380 10/22 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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