DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and slitrk4

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:XP_005157282.1 Gene:slitrk4 / 558123 ZFINID:ZDB-GENE-140303-1 Length:830 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
slitrk4XP_005157282.1 leucine-rich repeat 38..60 CDD:275380
leucine-rich repeat 61..84 CDD:275380
LRR_8 87..143 CDD:316378
leucine-rich repeat 87..108 CDD:275380
leucine-rich repeat 109..132 CDD:275380
LRR_8 132..190 CDD:316378
leucine-rich repeat 133..156 CDD:275380
leucine-rich repeat 157..179 CDD:275380
leucine-rich repeat 180..204 CDD:275380
leucine-rich repeat 205..364 CDD:275380
LRRCT 213..>253 CDD:214507
PLN00113 <341..433 CDD:331614
leucine-rich repeat 365..398 CDD:275380
LRR_8 398..457 CDD:316378
leucine-rich repeat 399..422 CDD:275380
leucine-rich repeat 423..446 CDD:275380
leucine-rich repeat 447..468 CDD:275380
leucine-rich repeat 471..493 CDD:275380
leucine-rich repeat 494..518 CDD:275380
PCC 498..>559 CDD:188093
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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