DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and lrrc40

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001011310.1 Gene:lrrc40 / 496765 XenbaseID:XB-GENE-968689 Length:605 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
lrrc40NP_001011310.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
LRR <82..348 CDD:227223
LRR 1 83..104
leucine-rich repeat 84..106 CDD:275380
LRR 2 106..127
leucine-rich repeat 107..129 CDD:275380
LRR 3 129..151
leucine-rich repeat 130..152 CDD:275380
LRR 4 152..173
leucine-rich repeat 153..175 CDD:275380
LRR 5 175..196
leucine-rich repeat 176..198 CDD:275380
LRR 6 198..219
leucine-rich repeat 199..221 CDD:275380
LRR 7 221..242
leucine-rich repeat 222..244 CDD:275380
internalin_A 238..>583 CDD:380193
LRR 8 244..265
leucine-rich repeat 245..266 CDD:275380
LRR 9 266..287
leucine-rich repeat 267..290 CDD:275380
LRR 10 290..311
leucine-rich repeat 291..313 CDD:275380
LRR 11 313..335
leucine-rich repeat 314..336 CDD:275380
LRR 12 336..357
leucine-rich repeat 337..355 CDD:275380
leucine-rich repeat 363..476 CDD:275380
LRR 13 429..450
LRR 14 453..475
LRR 15 476..497
leucine-rich repeat 477..522 CDD:275380
LRR 16 499..520
leucine-rich repeat 500..513 CDD:275380
LRR 17 522..543
leucine-rich repeat 523..546 CDD:275380
LRR 18 546..567
leucine-rich repeat 547..569 CDD:275380
LRR 19 569..590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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