DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and CG7896

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster


Alignment Length:608 Identity:141/608 - (23%)
Similarity:234/608 - (38%) Gaps:200/608 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 TLAIRNVQTELEVG-SGENADH--------LANLLDLDLT----GAAPINVHTNGFSILPNLRQL 109
            :||.:.:|...|:. :|....|        |.:|..|||:    |..|    |...:.:|.|:.|
  Fly   249 SLAFKGLQKIREIKLAGNRISHLNSDVFEKLQSLQKLDLSENFFGQFP----TVALAAVPGLKHL 309

  Fly   110 NLSGCGLVDIRGNHFAPESALQRIDFSHNQMELLDRDFFGNLRKLIYANFSHNALKQCD------ 168
            |||...|..:...|.....:|:.:|.|.|.:..:....|..:..|.|.:.|.|:|:..:      
  Fly   310 NLSSNMLQQLDYTHMQVVRSLESLDISRNTITTITPGTFREMGALKYLDLSLNSLRTIEDDALEG 374

  Fly   169 ---------------------LPHMPLLNRLELGHNR---------------------------- 184
                                 |..:|.|..|:|.:||                            
  Fly   375 LDSLQTLIIKDNNILLVPGSALGRLPQLTSLQLDYNRVAALSAEILGSLQAGDITTLSLSRNVIR 439

  Fly   185 -LVNATFGVCPQLQELILNDNQLIQLDVNAFRGLHG-LLELQLSGNRLSSIGLETFQPLAQLRKL 247
             |...:|.:...|..|.|:.|.|..::.:.|.||.. |:.|:||.|||:.:|...: .|.:||.|
  Fly   440 ELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQNRLTGLGGAPW-VLPELRSL 503

  Fly   248 NLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIASLSPA 312
            :||.|.|..|...:|..::|    :|.|:||||.:..|....|:.|.|||::|:|..:|..:|..
  Fly   504 DLSGNTLTELPSTIFEELEN----VQSLNLSGNHLTPLTGALFKPLDRLQVIDLSGCNIRQISGD 564

  Fly   313 HFVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSYN-----------NLEFLEEQIFGGNT 366
            ...||..|:.:||..|.:.|::..:|..|.|:.::|||.|           |:..|::....||.
  Fly   565 LLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSNNRIGSIRSGAFVNVMKLQKLDLHGNQ 629

  Fly   367 LPRMR-----------RLNLNGNRMKHLHPLAF------------------------SSLPFLEY 396
            |...:           .|:::.|::.:|.|.:|                        |:|.:||:
  Fly   630 LSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRIHPRLREIRAANNKFSFFPAELISTLQYLEH 694

  Fly   397 LKLGHNELKSLDVRMFAPMRR------------------------LQKLHLGHNLLEEINLDVLE 437
            :.|.||:||:::...||.:.|                        ||.|.|.||.|:.|.....|
  Fly   695 IDLSHNQLKTIEELDFARLPRLRVLLVANNQLDMVSEMAFHNSTQLQILDLAHNNLDRIGERTFE 759

  Fly   438 SLSSVQEILVDNNRLT--------------------------------------FLAKVNVS--- 461
            .|..::::.::.|||:                                      |::.|::|   
  Fly   760 GLVRLEQLNLEGNRLSELSDGVFERTKLQMLENINLAHNRFEYAPLNALQRQFFFVSSVDLSHNK 824

  Fly   462 ----------FPNLKRVAIEGNP 474
                      ..|:||:.:..||
  Fly   825 IKELPGDDSIMVNIKRIDLSFNP 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 51/209 (24%)
LRR_8 104..164 CDD:290566 17/59 (29%)
leucine-rich repeat 106..129 CDD:275380 7/22 (32%)
leucine-rich repeat 130..153 CDD:275380 5/22 (23%)
leucine-rich repeat 154..195 CDD:275380 14/96 (15%)
LRR_RI 194..455 CDD:238064 92/369 (25%)
LRR_8 194..254 CDD:290566 23/60 (38%)
leucine-rich repeat 196..219 CDD:275380 8/22 (36%)
leucine-rich repeat 220..243 CDD:275380 9/22 (41%)
leucine-rich repeat 244..267 CDD:275380 9/22 (41%)
LRR_8 271..330 CDD:290566 22/58 (38%)
leucine-rich repeat 272..295 CDD:275380 9/22 (41%)
leucine-rich repeat 296..319 CDD:275380 8/22 (36%)
LRR_8 319..380 CDD:290566 19/82 (23%)
leucine-rich repeat 320..343 CDD:275380 7/22 (32%)
leucine-rich repeat 344..369 CDD:275380 9/35 (26%)
LRR_8 368..428 CDD:290566 23/118 (19%)
leucine-rich repeat 370..393 CDD:275380 7/57 (12%)
leucine-rich repeat 394..417 CDD:275380 9/22 (41%)
leucine-rich repeat 418..441 CDD:275380 10/22 (45%)
CG7896NP_651754.1 LRR_8 109..172 CDD:290566
leucine-rich repeat 109..132 CDD:275380
LRR_RI <132..338 CDD:238064 25/92 (27%)
leucine-rich repeat 133..161 CDD:275380
LRR_8 160..220 CDD:290566
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
LRR_8 232..290 CDD:290566 11/40 (28%)
leucine-rich repeat 234..257 CDD:275380 2/7 (29%)
leucine-rich repeat 258..281 CDD:275380 4/22 (18%)
LRR_RI 273..535 CDD:238064 68/270 (25%)
LRR_8 281..338 CDD:290566 18/60 (30%)
leucine-rich repeat 282..329 CDD:275380 15/50 (30%)
LRR_8 328..388 CDD:290566 10/59 (17%)
leucine-rich repeat 330..353 CDD:275380 5/22 (23%)
leucine-rich repeat 354..377 CDD:275380 5/22 (23%)
leucine-rich repeat 378..401 CDD:275380 1/22 (5%)
leucine-rich repeat 402..425 CDD:275380 5/22 (23%)
leucine-rich repeat 428..451 CDD:275380 2/22 (9%)
LRR_8 429..487 CDD:290566 15/57 (26%)
leucine-rich repeat 452..473 CDD:275380 6/20 (30%)
leucine-rich repeat 477..497 CDD:275378 8/20 (40%)
LRR_8 498..558 CDD:290566 24/63 (38%)
leucine-rich repeat 500..523 CDD:275380 9/22 (41%)
LRR_RI 502..769 CDD:238064 70/270 (26%)
leucine-rich repeat 524..547 CDD:275380 9/22 (41%)
leucine-rich repeat 548..571 CDD:275380 8/22 (36%)
LRR_8 572..630 CDD:290566 16/57 (28%)
leucine-rich repeat 572..595 CDD:275380 7/22 (32%)
leucine-rich repeat 596..619 CDD:275380 5/22 (23%)
LRR_8 619..678 CDD:290566 9/58 (16%)
leucine-rich repeat 620..643 CDD:275380 4/22 (18%)
leucine-rich repeat 644..667 CDD:275380 5/22 (23%)
LRR_8 666..726 CDD:290566 12/59 (20%)
leucine-rich repeat 668..691 CDD:275380 2/22 (9%)
leucine-rich repeat 692..715 CDD:275380 9/22 (41%)
LRR_8 714..774 CDD:290566 12/59 (20%)
leucine-rich repeat 716..739 CDD:275380 0/22 (0%)
leucine-rich repeat 740..761 CDD:275380 9/20 (45%)
leucine-rich repeat 764..789 CDD:275380 3/24 (13%)
leucine-rich repeat 790..810 CDD:275380 0/19 (0%)
leucine-rich repeat 818..850 CDD:275380 7/30 (23%)
leucine-rich repeat 863..883 CDD:275378
LRR_RI <878..1070 CDD:238064
LRR_8 884..944 CDD:290566
LRR_4 884..925 CDD:289563
leucine-rich repeat 884..907 CDD:275380
leucine-rich repeat 908..933 CDD:275380
leucine-rich repeat 934..955 CDD:275380
leucine-rich repeat 958..982 CDD:275380
leucine-rich repeat 983..1055 CDD:275380
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
TPKR_C2 1121..1168 CDD:301599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453546
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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