DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and tlr5b

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001124067.2 Gene:tlr5b / 403139 ZFINID:ZDB-GENE-040219-15 Length:881 Species:Danio rerio


Alignment Length:634 Identity:152/634 - (23%)
Similarity:249/634 - (39%) Gaps:176/634 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLLWLLCMGFPILHGADLCQPIGWRNFQC------------------------------SEVASL 45
            |:|:.||:...::.....|..||: |..|                              :..:.|
Zfish    13 LILFGLCLNTEVVKSTSECSVIGY-NAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRL 76

  Fly    46 QDLVDLGAENWHT-LAIRNVQTELEVGSGENADHLANLLDLDLTGAAPINVHTNGFSILPNLRQL 109
            |||..|..|.... |.|||          .....|::|:.|.|.....:.:.|..|:.|.||..|
Zfish    77 QDLQFLKVEQQTPGLVIRN----------NTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 131

  Fly   110 NLSGCGL--VDIRGNHFAPESALQRIDFSHNQMELLD-RDFFGNLRKLIYANFSHNALKQ-C--D 168
            .|:.|.|  ..:.||.|.|.::|:.:....|.::.:. ..||.|:|:....:.:.|.:|. |  |
Zfish   132 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEED 196

  Fly   169 L-----PHMPLL-----------------------------NRLELGHN--------RLVNATFG 191
            |     .|..||                             ..|:|..|        |..:|..|
Zfish   197 LLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAG 261

  Fly   192 VCPQLQELILNDN----------QLIQLDVNAFRGLH--GLLELQLSGNRLSSIGLETFQPLAQL 244
            .  ::|.|||:::          .....|...|:||.  |:....||.:::.::....|.....|
Zfish   262 T--KIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDL 324

  Fly   245 RKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIASL 309
            .:|.|:||.::.:..|.|..    :.||.:|:||.|.:..:....|..|.:|::||:|.|.|.:|
Zfish   325 EQLTLAQNEINKIDDNAFWG----LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRAL 385

  Fly   310 SPAHFVGLGSLRKLYLQYNAILEIKPATFAALLNLD-----------------------TLDLSY 351
            ....|:||.:||||.|..||:..:.  |||||.||:                       ||||.:
Zfish   386 GDQSFLGLPNLRKLNLTGNAVESVH--TFAALPNLNKLYLGKNRISSVSSLPNIAHNLSTLDLEF 448

  Fly   352 NNLEFLEEQIFGGNTLPRMRRLNLNGNRMKHLHPLAFSS------LPFLEYLKLGHNELKSLD-- 408
            |.|..|.:........|::..:.|.||        .|||      :...:.|:|.|..|.|:.  
Zfish   449 NKLHALSDLYTILREFPQIENIFLQGN--------TFSSCYNQKQIVLSDKLQLLHLGLSSMQLI 505

  Fly   409 ------VRMFAPMRRLQKLHLGHNLLEEINLDVLESLSSVQEILVDNNRLTFLAK---------V 458
                  :.:||.:.:||:|.|..|.|:.:..|:.:.|:|:..:.:..|.|.:|..         :
Zfish   506 WSEGKCLNVFADLHQLQQLSLTANGLQSLPKDIFKDLTSLFFLDLSFNSLKYLPTDVFPKSLQIL 570

  Fly   459 NVSF-------PN----LKRVAIEGNPWQCPCFVK-LQHWLATRDVVYL 495
            |:.:       ||    |..:::..|.::|.|.:| .|.||...:|.::
Zfish   571 NLDYNSIYSVDPNLFSTLSYLSLMNNDFRCDCDLKDFQTWLNQTNVTFV 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 48/212 (23%)
LRR_8 104..164 CDD:290566 17/62 (27%)
leucine-rich repeat 106..129 CDD:275380 9/24 (38%)
leucine-rich repeat 130..153 CDD:275380 5/23 (22%)
leucine-rich repeat 154..195 CDD:275380 14/85 (16%)
LRR_RI 194..455 CDD:238064 83/309 (27%)
LRR_8 194..254 CDD:290566 17/71 (24%)
leucine-rich repeat 196..219 CDD:275380 8/34 (24%)
leucine-rich repeat 220..243 CDD:275380 3/22 (14%)
leucine-rich repeat 244..267 CDD:275380 7/22 (32%)
LRR_8 271..330 CDD:290566 24/58 (41%)
leucine-rich repeat 272..295 CDD:275380 7/22 (32%)
leucine-rich repeat 296..319 CDD:275380 10/22 (45%)
LRR_8 319..380 CDD:290566 25/83 (30%)
leucine-rich repeat 320..343 CDD:275380 12/22 (55%)
leucine-rich repeat 344..369 CDD:275380 8/47 (17%)
LRR_8 368..428 CDD:290566 19/73 (26%)
leucine-rich repeat 370..393 CDD:275380 6/28 (21%)
leucine-rich repeat 394..417 CDD:275380 7/30 (23%)
leucine-rich repeat 418..441 CDD:275380 8/22 (36%)
tlr5bNP_001124067.2 leucine-rich repeat 55..78 CDD:275380 1/22 (5%)
leucine-rich repeat 79..103 CDD:275380 8/33 (24%)
LRR_8 102..164 CDD:290566 18/61 (30%)
leucine-rich repeat 104..127 CDD:275380 6/22 (27%)
leucine-rich repeat 128..153 CDD:275380 9/24 (38%)
leucine-rich repeat 154..178 CDD:275380 5/23 (22%)
leucine-rich repeat 179..236 CDD:275380 8/56 (14%)
LRR_RI <224..478 CDD:238064 68/269 (25%)
LRR_8 298..356 CDD:290566 16/61 (26%)
leucine-rich repeat 300..323 CDD:275380 3/22 (14%)
leucine-rich repeat 324..347 CDD:275380 7/26 (27%)
LRR_8 346..404 CDD:290566 23/57 (40%)
leucine-rich repeat 348..371 CDD:275380 7/22 (32%)
leucine-rich repeat 372..395 CDD:275380 10/22 (45%)
LRR_8 394..451 CDD:290566 19/58 (33%)
leucine-rich repeat 396..417 CDD:275380 12/22 (55%)
leucine-rich repeat 441..482 CDD:275380 14/48 (29%)
leucine-rich repeat 494..520 CDD:275380 6/25 (24%)
LRR_8 520..577 CDD:290566 13/56 (23%)
leucine-rich repeat 521..544 CDD:275380 8/22 (36%)
leucine-rich repeat 545..563 CDD:275380 3/17 (18%)
leucine-rich repeat 567..587 CDD:275380 3/19 (16%)
LRRCT 596..645 CDD:214507 8/24 (33%)
TIR 712..846 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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