DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6749 and atk

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001262113.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster


Alignment Length:596 Identity:155/596 - (26%)
Similarity:248/596 - (41%) Gaps:141/596 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 HLANLLDLDLTGAAPINVHTNGFSILPNLRQLNLSGCGLVDIRGNHFAPESALQRIDFSHNQMEL 142
            :|..|..|||.......|.:...:.||:||:|:||..||:::..|.|.....|:.::.|.|::..
  Fly   428 NLPGLKGLDLAQNQFARVDSQLLAGLPSLRRLDLSENGLIELAPNSFRHNPLLETLNISSNELTK 492

  Fly   143 LDRDFFGNLRKLIYANFSHNALKQ-------------------CDLP-------HMPLLNRLELG 181
            :......:|.:|...:.|:|.||.                   ..||       .:|.|..|:|.
  Fly   493 IHSSTLIHLERLFEVDASYNQLKSVIAGLPRIVERISLKGNQITSLPAAASKDLQLPNLRMLDLS 557

  Fly   182 HNR---LVNATFGVCPQLQELILNDNQLIQLDVNAFRGLHGLLELQLSGNRLSSIGLETFQPLAQ 243
            .||   |....|....:|:.|.|..|:|.||...:|.|:..|..|.|..|:|.........|||:
  Fly   558 QNRIEQLPRHGFQGAMELRVLSLAQNELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAE 622

  Fly   244 LRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQFRVLARLQMLDVSRNSIAS 308
            ||.|||..|.|:|:..|.|....    .|:|||||.|.||.:....|.....|:.||:|.|::..
  Fly   623 LRNLNLQSNKLEAITDNFFSNNS----RLEQLDLSRNLIRSISPTAFDTQRSLEYLDLSGNALLD 683

  Fly   309 LSPAHFVGLG---SLRKLYLQY------------------------NAILEIKPATFAALLNLDT 346
            :|    ||||   :||.:.|.|                        |.|:|::..||..|..|..
  Fly   684 IS----VGLGNLNNLRDIDLSYNQISRIQSDVIGGWRNVVEIRLSNNLIVELQQGTFRNLPKLQY 744

  Fly   347 LDLSYN-----------NLEFLEEQIFGGN-----------TLPRMRRLNLNGNRMKHLHPLAFS 389
            ||||.|           .|:.|:|.:...|           .||.:...:...|:::::.|.:|.
  Fly   745 LDLSSNEIRNVEPGALKGLDELQEFVLADNKLVELKDHVFEELPSLLASHFQYNKLRYISPESFH 809

  Fly   390 SLPFLEYLKLGHNELKSLDVRMFAPMRRLQKLHLGHNLLEEINLDVLESLSSVQEILVDNN---- 450
            :...|.:|.|.:|..::::......||.|:.|.|..|.::.::...|::|:.:.|:.:|||    
  Fly   810 NANSLVFLNLSNNHFRNMENIGLRSMRNLEVLDLSTNGVKLVSTMPLKALNWLVELKMDNNQICR 874

  Fly   451 ----------RLTFLAKVNVSFPNLKR------------VAIEGNPWQCPCFVKLQHWLATRDVV 493
                      ||..|:..|....::|.            :.::|||..|.|.::   ||:    |
  Fly   875 IQGSPFETMPRLRVLSMRNNQLRSIKERTFRNVRGNIAILDVDGNPIDCNCEMQ---WLS----V 932

  Fly   494 YLRDNTGYYKG--------------ERPLCIVTNVDYCIQNLQAVRRLGIL---GD-FQGEQVEA 540
            :|::....|.|              ||.||:..:: |..:.... .:|.:|   || ||.:.  .
  Fly   933 WLQETNFPYPGPKCQDGRLLRSARMERSLCVGADI-YGNERTDG-NQLPLLNEHGDVFQRDL--P 993

  Fly   541 DAFDDDASAAQ 551
            |.|:|:..|.:
  Fly   994 DDFNDECEAGE 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 54/181 (30%)
LRR_8 104..164 CDD:290566 17/59 (29%)
leucine-rich repeat 106..129 CDD:275380 9/22 (41%)
leucine-rich repeat 130..153 CDD:275380 4/22 (18%)
leucine-rich repeat 154..195 CDD:275380 15/69 (22%)
LRR_RI 194..455 CDD:238064 90/323 (28%)
LRR_8 194..254 CDD:290566 23/59 (39%)
leucine-rich repeat 196..219 CDD:275380 9/22 (41%)
leucine-rich repeat 220..243 CDD:275380 7/22 (32%)
leucine-rich repeat 244..267 CDD:275380 10/22 (45%)
LRR_8 271..330 CDD:290566 25/85 (29%)
leucine-rich repeat 272..295 CDD:275380 10/22 (45%)
leucine-rich repeat 296..319 CDD:275380 10/25 (40%)
LRR_8 319..380 CDD:290566 23/106 (22%)
leucine-rich repeat 320..343 CDD:275380 10/46 (22%)
leucine-rich repeat 344..369 CDD:275380 11/46 (24%)
LRR_8 368..428 CDD:290566 14/59 (24%)
leucine-rich repeat 370..393 CDD:275380 3/22 (14%)
leucine-rich repeat 394..417 CDD:275380 5/22 (23%)
leucine-rich repeat 418..441 CDD:275380 6/22 (27%)
atkNP_001262113.1 leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
LRR_8 183..244 CDD:290566
leucine-rich repeat 185..209 CDD:275380
LRR_4 209..247 CDD:289563
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
LRR_RI 250..492 CDD:238064 20/63 (32%)
LRR_8 259..318 CDD:290566
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380
leucine-rich repeat 334..348 CDD:275378
LRR_8 358..418 CDD:290566
leucine-rich repeat 360..383 CDD:275380
leucine-rich repeat 384..407 CDD:275380
LRR_8 406..466 CDD:290566 13/37 (35%)
leucine-rich repeat 408..431 CDD:275380 1/2 (50%)
leucine-rich repeat 432..455 CDD:275380 6/22 (27%)
LRR_RI 447..705 CDD:238064 81/265 (31%)
LRR_8 454..514 CDD:290566 17/59 (29%)
leucine-rich repeat 456..476 CDD:275380 9/19 (47%)
leucine-rich repeat 480..501 CDD:275380 3/20 (15%)
leucine-rich repeat 505..517 CDD:275378 4/11 (36%)
leucine-rich repeat 525..550 CDD:275380 2/24 (8%)
LRR_8 549..609 CDD:290566 21/59 (36%)
leucine-rich repeat 551..574 CDD:275380 7/22 (32%)
leucine-rich repeat 575..598 CDD:275380 9/22 (41%)
leucine-rich repeat 599..622 CDD:275380 7/22 (32%)
LRR_8 622..681 CDD:290566 25/62 (40%)
leucine-rich repeat 623..646 CDD:275380 10/26 (38%)
LRR_RI 647..896 CDD:238064 65/252 (26%)
leucine-rich repeat 647..670 CDD:275380 10/22 (45%)
leucine-rich repeat 671..693 CDD:275380 10/25 (40%)
leucine-rich repeat 694..717 CDD:275380 4/22 (18%)
LRR_8 716..776 CDD:290566 16/59 (27%)
leucine-rich repeat 718..741 CDD:275380 6/22 (27%)
leucine-rich repeat 742..763 CDD:275380 6/20 (30%)
LRR_8 765..824 CDD:290566 12/58 (21%)
leucine-rich repeat 766..789 CDD:275380 4/22 (18%)
leucine-rich repeat 790..813 CDD:275380 3/22 (14%)
leucine-rich repeat 814..835 CDD:275380 4/20 (20%)
leucine-rich repeat 838..861 CDD:275380 6/22 (27%)
LRR_8 862..921 CDD:290566 11/58 (19%)
leucine-rich repeat 862..885 CDD:275380 4/22 (18%)
leucine-rich repeat 886..906 CDD:275380 4/19 (21%)
TPKR_C2 919..>946 CDD:301599 10/33 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.