DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and 18w

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster


Alignment Length:651 Identity:155/651 - (23%)
Similarity:245/651 - (37%) Gaps:191/651 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NWH----TLAIRNVQTELEVGSGENAD----HLANLLDLDLTGAAPINVHTNG-----FSILPNL 106
            ||.    |:.||.....||.|:|...|    ..|..|||..:...   :|.:.     |..|..|
  Fly    31 NWQYGLTTMDIRCSVRALESGTGTPLDLQVAEAAGRLDLQCSQEL---LHASELAPGLFRQLQKL 92

  Fly   107 RQLNLSGCGLVDIRGNHFAPESALQRIDF-SHN-------QMELLDRDFFGNLRKLIYANFSHNA 163
            .:|.:..|.|..:..|.|....:|:|:.. |||       .:||..:.|.| |::|...:...|.
  Fly    93 SELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQSFQG-LKELSELHLGDNN 156

  Fly   164 LKQ------CDLPHMPLLNRLELGHNRLVNATF-----GVCP----------------------- 194
            ::|      |.:|.:.|||   |..||:.:|.|     .:|.                       
  Fly   157 IRQLPEGVWCSMPSLQLLN---LTQNRIRSAEFLGFSEKLCAGSALSNANGAVSGGSELQTLDVS 218

  Fly   195 -----------------QLQELILNDNQLIQLDVNAFRGLHGLLELQLSGNRLSSIGLETFQPLA 242
                             :||.|.|..|.:..|..||..||..|..|.:|.|.|.|:..|.|....
  Fly   219 FNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGNK 283

  Fly   243 QLRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRI--RLLFDNQFRVLARLQMLDVSRNS 305
            :||:|:|..|.|..|...:...::..::    ||||||::  ..:.::.|..|.||.:|::|.|:
  Fly   284 ELRELHLQGNDLYELPKGLLHRLEQLLV----LDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNA 344

  Fly   306 IASLSPAHFVGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSYNNLEFLEEQIFGG------ 364
            :..:....|..|..|:.|.::.|:|..|:...|..|.||.||:|:.|.|..|:.:||.|      
  Fly   345 LTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTK 409

  Fly   365 ----NTL------------PRMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLGHNELK-------- 405
                |.|            ..::.|:|:.|::..: |.|...|..|:.|.||.|::.        
  Fly   410 LTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEV-PEAVQDLSMLKTLDLGENQISEFKNNTFR 473

  Fly   406 ----------------SLDVRMFAPMRRLQKLHLGHNLLEEINLDVLESLSSVQEILVDNNRLTF 454
                            ::.|.||..:.||..|:|..|.::.|.....:..:.::.|.:|.|   |
  Fly   474 NLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKN---F 535

  Fly   455 LAKVNVSF-------------------------PNLKRVAIEGNPWQCPCFVKLQHWLATRDVVY 494
            |..:|..|                         .|||.:.|.||                    |
  Fly   536 LTDINGIFATLASLLWLNLSENHLVWFDYAFIPSNLKWLDIHGN--------------------Y 580

  Fly   495 LRDNTGYYKGERPLCIVTNVDYCIQNL---------QAVRRLGILGDFQGEQVEADAFDDDASAA 550
            :.....|||.:..: .||.:|.....:         .::..|.|..:..| |::|:.|.|....|
  Fly   581 IEALGNYYKLQEEI-RVTTLDASHNRITEIGAMSVPNSIELLFINNNIIG-QIQANTFVDKTRLA 643

  Fly   551 Q 551
            :
  Fly   644 R 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 55/211 (26%)
LRR_8 104..164 CDD:290566 18/67 (27%)
leucine-rich repeat 106..129 CDD:275380 6/22 (27%)
leucine-rich repeat 130..153 CDD:275380 10/30 (33%)
leucine-rich repeat 154..195 CDD:275380 14/91 (15%)
LRR_RI 194..455 CDD:238064 83/348 (24%)
LRR_8 194..254 CDD:290566 23/99 (23%)
leucine-rich repeat 196..219 CDD:275380 10/22 (45%)
leucine-rich repeat 220..243 CDD:275380 8/22 (36%)
leucine-rich repeat 244..267 CDD:275380 7/22 (32%)
LRR_8 271..330 CDD:290566 18/60 (30%)
leucine-rich repeat 272..295 CDD:275380 8/24 (33%)
leucine-rich repeat 296..319 CDD:275380 6/22 (27%)
LRR_8 319..380 CDD:290566 23/82 (28%)
leucine-rich repeat 320..343 CDD:275380 7/22 (32%)
leucine-rich repeat 344..369 CDD:275380 12/46 (26%)
LRR_8 368..428 CDD:290566 19/83 (23%)
leucine-rich repeat 370..393 CDD:275380 6/22 (27%)
leucine-rich repeat 394..417 CDD:275380 8/46 (17%)
leucine-rich repeat 418..441 CDD:275380 5/22 (23%)
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380 6/27 (22%)
leucine-rich repeat 92..115 CDD:275380 6/22 (27%)
LRR_8 115..181 CDD:290566 20/69 (29%)
leucine-rich repeat 116..146 CDD:275380 10/30 (33%)
leucine-rich repeat 147..170 CDD:275380 4/22 (18%)
leucine-rich repeat 171..201 CDD:275380 9/32 (28%)
LRR_RI 210..464 CDD:238064 71/258 (28%)
leucine-rich repeat 212..236 CDD:275380 0/23 (0%)
LRR_8 235..295 CDD:290566 23/59 (39%)
leucine-rich repeat 237..260 CDD:275380 10/22 (45%)
leucine-rich repeat 261..284 CDD:275380 8/22 (36%)
LRR_8 283..345 CDD:290566 20/65 (31%)
leucine-rich repeat 285..308 CDD:275380 7/22 (32%)
leucine-rich repeat 309..334 CDD:275380 8/28 (29%)
LRR_8 334..393 CDD:290566 20/58 (34%)
leucine-rich repeat 335..358 CDD:275380 6/22 (27%)
leucine-rich repeat 359..382 CDD:275380 7/22 (32%)
LRR_8 382..441 CDD:290566 16/58 (28%)
leucine-rich repeat 383..406 CDD:275380 10/22 (45%)
leucine-rich repeat 407..430 CDD:275380 2/22 (9%)
LRR_8 431..488 CDD:290566 11/57 (19%)
leucine-rich repeat 431..451 CDD:275380 5/20 (25%)
leucine-rich repeat 454..477 CDD:275380 5/22 (23%)
LRR_8 477..559 CDD:290566 16/84 (19%)
leucine-rich repeat 478..499 CDD:275380 3/20 (15%)
leucine-rich repeat 502..525 CDD:275380 5/22 (23%)
leucine-rich repeat 526..548 CDD:275380 7/24 (29%)
leucine-rich repeat 590..617 CDD:275380 3/27 (11%)
leucine-rich repeat 618..641 CDD:275380 7/23 (30%)
leucine-rich repeat 642..689 CDD:275380 1/3 (33%)
LRRCT 679..736 CDD:214507
leucine-rich repeat 775..796 CDD:275380
LRR_8 797..852 CDD:290566
leucine-rich repeat 797..817 CDD:275380
leucine-rich repeat 818..841 CDD:275380
LRR_8 841..900 CDD:290566
leucine-rich repeat 842..865 CDD:275380
LRR_4 866..907 CDD:289563
leucine-rich repeat 866..889 CDD:275380
leucine-rich repeat 890..911 CDD:275380
TIR 1045..1183 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453548
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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