DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and conv

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster


Alignment Length:481 Identity:136/481 - (28%)
Similarity:219/481 - (45%) Gaps:93/481 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VASLQDLVDLGAENWHTL-AIRNVQTELEVGSGENADHLANLLDLDLTG-AAPINVHTNGFSILP 104
            :|:::|.|..|..|  || .:..::|        |..|: .||...:.| |..:.:..:.|..||
  Fly   110 LATIEDYVFYGVNN--TLEQLHLLRT--------NLSHV-GLLGFGILGKAKELVIDGHAFQQLP 163

  Fly   105 -----------NLRQLNLSGCGLVDIRGNHFAPESALQRIDFSHNQMELLDRDFFGNLRKLIYAN 158
                       :|..:.::...|.|:....|.|...|:.:|...||:|.|.|:.|.|||:|...:
  Fly   164 KDLFAGQEIANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLD 228

  Fly   159 FSHNALKQCDLPHMPLLNRL---ELGHN---RLVNATFGVCPQLQELILNDNQLIQLDVNAFRGL 217
            .|||.:|:.:..|:..|.:|   .:.||   .|...||.....|:.|.|:.||:.:||.|:|||:
  Fly   229 ISHNQIKKLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGM 293

  Fly   218 HGLLELQLSGNRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRI 282
            ..|..|.||.|.|:.||..||..:|::..::|::|.|..:...:| ...|:|   :.|||:.|.|
  Fly   294 RFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMF-TQMNYV---ELLDLAENNI 354

  Fly   283 RLLFDNQFRVL-----------------------ARLQMLDVSRNSIASLSPAHF---------- 314
            ..:..|.|:.:                       ..:.:||:|.|.:|:.|...|          
  Fly   355 TKIEKNSFKDIYQAIINVSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQ 419

  Fly   315 --------------VGLGSLRKLYLQYNAILEIKPATFAALLNLDTLDLSYNNLEFLEEQIFGG- 364
                          ..:..|:.|...||:|.||....|..|..|.|:|:|:||:    ..||.| 
  Fly   420 LSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNI----SSIFNGV 480

  Fly   365 -NTLPRMRRLNLNGNRMKHLHPLAFSSLPFLEYLKLGHNELKSLDVRMFAPMRRLQKLHLGHNLL 428
             .||..:|.::|:.|.|:.:....|.:||.|..:.|.||||.|:.....|.:..|::|:|.:|.|
  Fly   481 FQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQL 545

  Fly   429 EEI-NLDVLESLSSVQEILVDNNRLT 453
            |:: .|.:     |:.|:...:||||
  Fly   546 EKLFQLPI-----SLNELYFSHNRLT 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 56/169 (33%)
LRR_8 104..164 CDD:290566 21/70 (30%)
leucine-rich repeat 106..129 CDD:275380 5/22 (23%)
leucine-rich repeat 130..153 CDD:275380 10/22 (45%)
leucine-rich repeat 154..195 CDD:275380 13/46 (28%)
LRR_RI 194..455 CDD:238064 90/310 (29%)
LRR_8 194..254 CDD:290566 24/59 (41%)
leucine-rich repeat 196..219 CDD:275380 11/22 (50%)
leucine-rich repeat 220..243 CDD:275380 10/22 (45%)
leucine-rich repeat 244..267 CDD:275380 4/22 (18%)
LRR_8 271..330 CDD:290566 18/105 (17%)
leucine-rich repeat 272..295 CDD:275380 7/45 (16%)
leucine-rich repeat 296..319 CDD:275380 7/46 (15%)
LRR_8 319..380 CDD:290566 23/62 (37%)
leucine-rich repeat 320..343 CDD:275380 9/22 (41%)
leucine-rich repeat 344..369 CDD:275380 11/26 (42%)
LRR_8 368..428 CDD:290566 19/59 (32%)
leucine-rich repeat 370..393 CDD:275380 6/22 (27%)
leucine-rich repeat 394..417 CDD:275380 8/22 (36%)
leucine-rich repeat 418..441 CDD:275380 7/23 (30%)
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380 6/31 (19%)
leucine-rich repeat 150..175 CDD:275380 3/24 (13%)
leucine-rich repeat 176..199 CDD:275380 5/22 (23%)
LRR_8 198..258 CDD:290566 21/59 (36%)
leucine-rich repeat 200..223 CDD:275380 10/22 (45%)
LRR_RI 201..545 CDD:238064 104/351 (30%)
leucine-rich repeat 224..271 CDD:275380 13/46 (28%)
LRR_8 245..306 CDD:290566 23/60 (38%)
leucine-rich repeat 272..295 CDD:275380 11/22 (50%)
LRR_8 296..354 CDD:290566 21/61 (34%)
leucine-rich repeat 296..319 CDD:275380 10/22 (45%)
LRR_8 322..401 CDD:290566 17/82 (21%)
leucine-rich repeat 322..343 CDD:275380 4/21 (19%)
leucine-rich repeat 344..367 CDD:275380 8/25 (32%)
leucine-rich repeat 371..390 CDD:275380 0/18 (0%)
leucine-rich repeat 391..414 CDD:275380 7/22 (32%)
leucine-rich repeat 416..438 CDD:275380 0/21 (0%)
LRR_8 437..495 CDD:290566 22/61 (36%)
leucine-rich repeat 439..462 CDD:275380 9/22 (41%)
leucine-rich repeat 463..486 CDD:275380 11/26 (42%)
LRR_RI 486..738 CDD:238064 28/86 (33%)
LRR_8 486..545 CDD:290566 19/58 (33%)
leucine-rich repeat 487..510 CDD:275380 6/22 (27%)
leucine-rich repeat 511..534 CDD:275380 8/22 (36%)
leucine-rich repeat 535..554 CDD:275380 7/23 (30%)
LRR_8 554..614 CDD:290566 6/13 (46%)
leucine-rich repeat 555..578 CDD:275380 5/12 (42%)
leucine-rich repeat 579..603 CDD:275380
leucine-rich repeat 604..627 CDD:275380
LRR_8 626..710 CDD:290566
leucine-rich repeat 628..649 CDD:275380
leucine-rich repeat 652..672 CDD:275380
LRR_8 698..765 CDD:290566
leucine-rich repeat 700..726 CDD:275380
leucine-rich repeat 727..745 CDD:275380
LRR_8 777..839 CDD:290566
leucine-rich repeat 779..802 CDD:275380
leucine-rich repeat 829..852 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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