DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and Lrrc4b

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001258010.1 Gene:Lrrc4b / 308571 RGDID:1307121 Length:709 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
Lrrc4bNP_001258010.1 LRRNT 59..92 CDD:214470
LRR <89..299 CDD:227223
LRR 1 89..110
leucine-rich repeat 90..113 CDD:275380
LRR 2 113..134
leucine-rich repeat 114..137 CDD:275380
LRR 3 137..158
leucine-rich repeat 138..161 CDD:275380
LRR 4 161..182
leucine-rich repeat 162..185 CDD:275380
LRR 5 185..207
leucine-rich repeat 186..210 CDD:275380
LRR 6 210..231
leucine-rich repeat 211..232 CDD:275380
LRR 7 232..253
leucine-rich repeat 233..256 CDD:275380
LRR 8 256..277
leucine-rich repeat 257..280 CDD:275380
LRR 9 280..301
leucine-rich repeat 281..302 CDD:275380
LRRCT 313..363 CDD:214507
I-set 366..455 CDD:400151
Ig strand A 366..369 CDD:409353
Ig strand A' 373..376 CDD:409353
Ig strand B 382..389 CDD:409353
Ig strand C 395..400 CDD:409353
Ig strand C' 403..405 CDD:409353
Ig strand D 414..418 CDD:409353
Ig strand E 421..425 CDD:409353
Ig strand F 435..442 CDD:409353
Ig strand G 445..455 CDD:409353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..552
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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