DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and Lrrtm3

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001099857.1 Gene:Lrrtm3 / 294380 RGDID:1304866 Length:582 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
Lrrtm3NP_001099857.1 LRRNT 33..61 CDD:214470
LRR 1 61..83
leucine-rich repeat 66..86 CDD:275380
LRR_RI <81..300 CDD:238064
LRR 2 84..107
LRR_8 86..145 CDD:290566
leucine-rich repeat 87..110 CDD:275380
LRR 3 109..131
leucine-rich repeat 111..134 CDD:275380
LRR 4 132..155
LRR_8 133..193 CDD:290566
leucine-rich repeat 135..158 CDD:275380
LRR 5 156..179
leucine-rich repeat 159..182 CDD:275380
LRR_8 181..241 CDD:290566
LRR 6 181..203
leucine-rich repeat 183..206 CDD:275380
LRR 7 205..227
leucine-rich repeat 207..230 CDD:275380
LRR 8 229..251
LRR_8 230..290 CDD:290566
leucine-rich repeat 231..254 CDD:275380
LRR 9 252..276
leucine-rich repeat 255..279 CDD:275380
LRR 10 277..300
leucine-rich repeat 280..300 CDD:275380
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..411
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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