DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6749 and Podnl1

DIOPT Version :9

Sequence 1:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001013402.2 Gene:Podnl1 / 244550 MGIID:2685352 Length:559 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064
LRR_8 104..164 CDD:290566
leucine-rich repeat 106..129 CDD:275380
leucine-rich repeat 130..153 CDD:275380
leucine-rich repeat 154..195 CDD:275380
LRR_RI 194..455 CDD:238064
LRR_8 194..254 CDD:290566
leucine-rich repeat 196..219 CDD:275380
leucine-rich repeat 220..243 CDD:275380
leucine-rich repeat 244..267 CDD:275380
LRR_8 271..330 CDD:290566
leucine-rich repeat 272..295 CDD:275380
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..380 CDD:290566
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..369 CDD:275380
LRR_8 368..428 CDD:290566
leucine-rich repeat 370..393 CDD:275380
leucine-rich repeat 394..417 CDD:275380
leucine-rich repeat 418..441 CDD:275380
Podnl1NP_001013402.2 leucine-rich repeat 50..68 CDD:275380
LRR 1. /evidence=ECO:0000255 66..89
leucine-rich repeat 69..92 CDD:275380
LRR_8 70..129 CDD:290566
LRR 2. /evidence=ECO:0000255 90..115
leucine-rich repeat 93..118 CDD:275380
LRR 3. /evidence=ECO:0000255 117..139
leucine-rich repeat 119..163 CDD:275380
LRR_8 138..200 CDD:290566
LRR 4. /evidence=ECO:0000255 140..160
LRR_RI 161..345 CDD:238064
LRR 5. /evidence=ECO:0000255 161..186
leucine-rich repeat 164..189 CDD:275380
LRR 6. /evidence=ECO:0000255 188..208
leucine-rich repeat 190..210 CDD:275380
LRR 7. /evidence=ECO:0000255 209..231
LRR_8 210..271 CDD:290566
leucine-rich repeat 211..234 CDD:275380
LRR 8. /evidence=ECO:0000255 233..257
leucine-rich repeat 235..260 CDD:275380
LRR 9. /evidence=ECO:0000255 258..281
leucine-rich repeat 261..305 CDD:275380
LRR 10. /evidence=ECO:0000255 283..302
LRR_RI 292..553 CDD:238064
LRR 11. /evidence=ECO:0000255 303..328
leucine-rich repeat 306..331 CDD:275380
LRR 12. /evidence=ECO:0000255 329..352
leucine-rich repeat 332..402 CDD:275380
LRR_8 351..413 CDD:290566
LRR 13. /evidence=ECO:0000255 354..373
LRR 14. /evidence=ECO:0000255 374..399
LRR 15. /evidence=ECO:0000255 400..423
leucine-rich repeat 403..423 CDD:275380
LRR_8 423..484 CDD:290566
leucine-rich repeat 424..447 CDD:275380
LRR 16. /evidence=ECO:0000255 425..444
LRR 17. /evidence=ECO:0000255 445..470
leucine-rich repeat 448..473 CDD:275380
LRR 18. /evidence=ECO:0000255 471..494
LRR_8 474..529 CDD:290566
leucine-rich repeat 474..494 CDD:275380
leucine-rich repeat 495..513 CDD:275380
LRR 19. /evidence=ECO:0000255 496..515
LRR 20. /evidence=ECO:0000255 517..541
leucine-rich repeat 519..544 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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